Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2196 |
Symbol | |
ID | 6878187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2175715 |
End bp | 2176809 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642790054 |
Product | rod shape-determining protein RodA |
Protein accession | YP_002220606 |
Protein GI | 198284285 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00465004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTGGC ACACACGCCT GCTGAAGCCC CTGCAGAAAC TGGACCCGGC AATCATGACG GGGGTGGTAA TGCTCATGCT CATCAGCCTC GCGGTGATCT ACAGTGGCAG CCAGGAAAGT ATCCGCATCG TGCTTGCCCA ACTTTTGCGA TTCGCGATCG GCATCCTCGT CCTCATTCTC ATTGCCAATA CACCACCGGA GCGTATTCGC GCCTGGGCAC CCGCCTTGTA CGCTACAGGC GTCCTCTTAC TGGTGATCAC ACTCGTGGCG GGCAAAGCCA ATCTCGGCGC ACGCCGCTGG CTGGGCGTCG GCCCGCTGAC CTTTCAGCCC TCGGAGCTCA TGAAACTTGC CCTACCCCTG TTCCTCGCCT ATTACTATTC GCAACGGGAA AATGTTCGCC ACTGGCTTTC CGCCGTCACC GGATTTGTGC TGATTGCCAT CCCCTTTCTG CTCATCGCCA AGGAGCCGGA TCTGGGTACG GCGGCGCAAA TTGGCGCTGC CGGGGTCTTC ATGATGTGGC TGGCGGGTGT GCGCCGCCGA TGGTTTATCG CGTTGATCAT CCTAGCCGCC ATCAGTGGGC CGGTACTCTG GCATTTTCTG CATGGATACC AAAAAGAACG CATACTGACC TTTCTCGATC CTCAACGCGA CCCCCTGGGC GCCGGTTATC ACATCATCCA GAGCATGATT GCCGTGGGTT CGGGAGGATT CTGGGGGAAG GGCTGGTTCA ACGGTACCCA GGTCAACCTC GATTTCCTGC CGGAAGCCCA GACCGACTTC GTTTTTGCGG GATTTGCCGA GGAGTTTGGT CTGGTCGGCG TCCTGATCCT CATCTCTACT TATCTGCTCA TCGTCCTGCG CGGGCTGGTC ATTGCCTACG AAAGCCGTGA CGCCTTCGGC CGTCTCATCG CCGGCACCCT GAGTCTGACG TTTTTTCTTT ATATTTTCAT AAATATGGGT ATGACCACCG GAATTCTTCC GGTAGTCGGA GTGCCGCTGC CACTGGTAAG CTATGGTGGG ACCGCCATGC TGACTTTCAT GGTCGGACTG GGCATACTGA TGTCGGTCCA CGCCCATCCA CGCATCCACG AATGA
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Protein sequence | MSWHTRLLKP LQKLDPAIMT GVVMLMLISL AVIYSGSQES IRIVLAQLLR FAIGILVLIL IANTPPERIR AWAPALYATG VLLLVITLVA GKANLGARRW LGVGPLTFQP SELMKLALPL FLAYYYSQRE NVRHWLSAVT GFVLIAIPFL LIAKEPDLGT AAQIGAAGVF MMWLAGVRRR WFIALIILAA ISGPVLWHFL HGYQKERILT FLDPQRDPLG AGYHIIQSMI AVGSGGFWGK GWFNGTQVNL DFLPEAQTDF VFAGFAEEFG LVGVLILIST YLLIVLRGLV IAYESRDAFG RLIAGTLSLT FFLYIFINMG MTTGILPVVG VPLPLVSYGG TAMLTFMVGL GILMSVHAHP RIHE
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