Gene Lferr_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2192 
Symbol 
ID6878183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2171534 
End bp2172577 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID642790050 
Productrod shape-determining protein MreB 
Protein accessionYP_002220602 
Protein GI198284281 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.728891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000188341 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATATTTA AACGAATTCT TGGCCTTTTC TCCACCGACC TGGCCGTAGA CCTGGGTACC 
GCCAACACCC TGATTTACGT ACGCGGCAAG GGTATTGTGC TCTCCGAGCC CTCCGTGGTA
GCCATCCACA CCGGACGGCA TGGGGCTACC AGCCGACAGT TGCACGTCGG AGAGGAAGCC
AAACGTATGC TGGGCCGCAC ACCGGCCAAC ATTACGGCCA TCCGGCCGCT GAAAGACGGT
GTGATTGCCG ATTTCCAGAT TACCGAGGCC ATGCTCAAGC ACTTCATCAA ACGTGTGCAT
CATCAACGTT TCCTCAGCCC CAGTCCGCGG ATCATCGTCT GTGTACCCTA TGGTGCAACA
CAAGTGGAAC GGCGCGCCAT CCGTGAATCG GCGATGAGCG CCGGGGCGCG CGAAGTGCAC
CTGATCGAGG AGCCGATGGC TGCCGCCATC GGCGCCGGGA TGCCCGTTGC GGAGCCCACT
GGCTCCATGG TGGTGGATAT TGGCGGCGGC ACTACCGAAG TCGGCGTCAT CGCATTGGGC
GGGGTGGTCT ACTCCCAGAG TGTGCGGGTA GGCGGCGACA AAATGGACGA GGCGATCGTC
AACTATATCC GGCGCAATTA CGGCATGCTG ATCGGCGAGA CGACCGCCGA AGAGATCAAG
AAGAAGGTTG GCTGCGCTTA TCCCGGTCAG GAAGTGCTCA GTATAGAAGT GCGCGGTCGC
AATCTCGCCG AAGGCGTTCC CCGGACATTT ACGATTACCA GCAATGAAAT CCTCGAAGCC
CTCCAGGAAC CATTAGGCGC CATTGTCGGT GCCATCAGAC TGGCCCTGGA GCAAACCCCC
CCCGAACTCG CGGGCGATAT CGCTGAACGG GGCATGGTGT TGACGGGTGG CGGCGCCCTC
CTTCGCGATC TGGATCGACT GATCATGGAG GAAACCGCGC TACCGGTCAT CGTTGCGGAG
GATCCATTGA CCTGCGTGGC ACGGGGCAGC GGCCGGGCAC TGGAAGAACT GGAGTTGCTG
GGTGAGGTAT TTGCCGACGA TTAA
 
Protein sequence
MIFKRILGLF STDLAVDLGT ANTLIYVRGK GIVLSEPSVV AIHTGRHGAT SRQLHVGEEA 
KRMLGRTPAN ITAIRPLKDG VIADFQITEA MLKHFIKRVH HQRFLSPSPR IIVCVPYGAT
QVERRAIRES AMSAGAREVH LIEEPMAAAI GAGMPVAEPT GSMVVDIGGG TTEVGVIALG
GVVYSQSVRV GGDKMDEAIV NYIRRNYGML IGETTAEEIK KKVGCAYPGQ EVLSIEVRGR
NLAEGVPRTF TITSNEILEA LQEPLGAIVG AIRLALEQTP PELAGDIAER GMVLTGGGAL
LRDLDRLIME ETALPVIVAE DPLTCVARGS GRALEELELL GEVFADD