Gene Lferr_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2188 
Symbol 
ID6878179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2168769 
End bp2169098 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID642790046 
ProductRhodanese domain protein 
Protein accessionYP_002220598 
Protein GI198284277 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0415469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000235552 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGGAT TTCAGGAAAT CACTGCGGAT CAGCTCAAAG CCTTACGGGA ACAGGGAGGG 
GCGTTTACGC TGATTGACGT GCGCTCGCCC GGCGAAGTGG CGCGGGGCGT CATCGATGGT
GCCAGACACC TGCCGCTGCA CCTGCTTCCC ATGTCCGTGC AGCAGATGGA TAAATCGCAA
CCGCTCGTTT TTTACTGCCT GAGCGGCGGG CGTTCGGCGC AGGCGGCGGC TTTCGCGGCG
TCCCAAGGTT TCGGCCAAGT GCTTAATTTG CGTGGCGGAA TCTCCGCCTG GGTCAACCGG
GGGTTCCCCT TGGTCCAGTT GTCCAGTTGA
 
Protein sequence
MYGFQEITAD QLKALREQGG AFTLIDVRSP GEVARGVIDG ARHLPLHLLP MSVQQMDKSQ 
PLVFYCLSGG RSAQAAAFAA SQGFGQVLNL RGGISAWVNR GFPLVQLSS