Gene Lferr_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2186 
Symbol 
ID6878177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2167901 
End bp2168371 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content53% 
IMG OID642790044 
Producthypothetical protein 
Protein accessionYP_002220596 
Protein GI198284275 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0361535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000354849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGAGA AAAAGTTGGC AATTATCGCT ACGAAGGGCA CCCTGGATTG GGGTTATCCG 
CCCTTCATCC TGGCATCTAC CGCAGCGGCG CTCGGCTATG GGGTTGAAAT ATTTTTCACC
TTCTACGGCC TGCAGTTGTT GAAGAAGGAT TTGAGCCATC TGCGCGTGAG TCCGCTCGGG
AATCCCGCAA TGCCCATGCC GATACCGATG CCGACACTGA TGATGGTGCT CCCCGGCATG
GAAGGGATGG CTACCTCCAT GATGAAGAGC AAAATGAAGG CAAAGGGTGT AGCCAGTCTG
GAAGAACTTC GTGAGCTCTG TGTCGAAGCA GAAGTACGGA TGATCGCCTG CCAGATGACC
GTTGATCTTT TCGAGTTTGA CACCGCGGAT TTCATTGACG GCATTGAACT CGGTGGTGCT
GCCTCGTTCT TTGAGTTCGC CGGAGAGTCA GATATTACGC TCTTCATGTG A
 
Protein sequence
MDEKKLAIIA TKGTLDWGYP PFILASTAAA LGYGVEIFFT FYGLQLLKKD LSHLRVSPLG 
NPAMPMPIPM PTLMMVLPGM EGMATSMMKS KMKAKGVASL EELRELCVEA EVRMIACQMT
VDLFEFDTAD FIDGIELGGA ASFFEFAGES DITLFM