Gene Lferr_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2185 
Symbol 
ID6878176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2167151 
End bp2167837 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content54% 
IMG OID642790043 
Producthypothetical protein 
Protein accessionYP_002220595 
Protein GI198284274 
COG category[C] Energy production and conversion 
COG ID[COG1150] Heterodisulfide reductase, subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.32077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000457726 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACTT ACGCTGAAAT GAGGGAGATG TTCGACGAAA TCCGTGCGGA TTTTCGTTAT 
GACCACGAAC TCAATGGATG TTTGAATTGT GGCATTTGCA CGGCCACCTG CCCGTCTGCG
CAGTTCTATG ACTATAGCCC GCGCGAGATT GTGCAGTTGT TGTGGACGGA AAATGTCGAG
CAGATCTACG ATGCGATGCA GGAGAAAATG TGGGCCTGTG CGCAGTGTAT GACCTGTGCC
GCACGCTGTC CTTTCAAGAA TTCCCCCGGT GGGCTTGTCA TGATCATGCG CGAAGTGTCC
ATCCGCCATG GCATGCAGTC GGCTAAAGAT GTGCTGCGAC CGTTCGGGCG CGTCATGCTC
AAGCTGATCA CCACGGGCAA TCAGTTGTCC CCCGACATGA TCCAGCCCGA TCACTTCCCC
GACTGGGGCC CCAATATCCA GAAGGTGGAA GGCGACTTGC GCATACTGCG TAAAGCCATT
CCGGTGCGCA CCTTGCAAAC CGTGGAAACG GCGTGGGAAG TGTCGCTAAA AACCTCCGTC
GAGATGTACA CCATCTGGGA AATGACGGGC GTGCTGAAGT CATTGGAAAC CATGGATGAA
AACCTTTTCG ACGTCATTGA GGACTTCATT GACGAGAAAC GTGAAGACTA TGAAGACTGG
CTCGAGAGCC AGAACGACAA GGACTGA
 
Protein sequence
MATYAEMREM FDEIRADFRY DHELNGCLNC GICTATCPSA QFYDYSPREI VQLLWTENVE 
QIYDAMQEKM WACAQCMTCA ARCPFKNSPG GLVMIMREVS IRHGMQSAKD VLRPFGRVML
KLITTGNQLS PDMIQPDHFP DWGPNIQKVE GDLRILRKAI PVRTLQTVET AWEVSLKTSV
EMYTIWEMTG VLKSLETMDE NLFDVIEDFI DEKREDYEDW LESQNDKD