| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2184 |
|---|
| Symbol | |
|---|
| ID | 6878175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2165797 |
|---|
| End bp | 2167140 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642790042 |
|---|
| Product | protein of unknown function DUF224 cysteine-rich region domain protein |
|---|
| Protein accession | YP_002220594 |
|---|
| Protein GI | 198284273 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2048] Heterodisulfide reductase, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0444039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000000677612 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA ACAGCACACA GCAAGGCGTG GCGGGGCACG GCGCCTTCTT TCAGGACACG
AATCTTTCGG CGAACGAAGC CGAAGCGGCA ACGGCCTGGG TGCGCAGCCA TGTCGACCGG
CGTACGATGG ACCTGGGCGA GCGGATGGAT GACGTCCGTG ATCACATGTG GCAGTTGGAG
AAGGAAGGCG AAATCATCGT CCACCGCCTT ACGGACCAGC ACAAGCCCGT TGAAGTAGAT
ACTCTGTATG GCTGGAAAAA GCGGATTCCT ACGAATCAGT TCTGGCATCA TAAGAGTTGC
GGGCAGTGCG GCAACATCCC CGGCTATCCC ACCAGTATCC TCTGGTTCAT GAACAAGTTT
GGCATGGACT ATCTGGACGA GACCGACCAG ACTTCCTGCA CCGCCTGGAA CTACCATGGC
TCCGGCATCG GCAATGTGGA GTCCCTGGCC GCCGTCTTCC TGCGCAACTT CCATCAGGCC
TACGTCTCCG GCAAGCAGCA CGGCTTCGAG AACGGCCACT TCTACCCTCT GGTGCACTGC
GGCACCTCCT TCGGCAACTA CAAGGAGATC CGCAAATACC TCATCGAGTC CGCCGAACTG
CGGGAGAAGG TCAAGAAGAT CCTCGGCAAA CTGGGCCGTC TGGTGGACGG CAAGATCGTC
ATCCCCGAGG AAGTGGTCCA CTACAGCGAA TGGCTGCACG TCATGCGCAA CCGTATCGCC
AGCGAATTGC AGACCATCGA CATGAGCAAC ATCCGGGTCA CCAACCACGC CGCCTGTCAC
TATTACAAGA TGGTGGCGGA AGACGCCGTC TACGACAACA CGGTGCTGGG CGGTAATCGT
ACCGCTGTCG GCACCTCCGT CGCCCAGGCG CTGGGTGCCC AGGTCATCGA CTACTCCACC
TGGTATGACT GCTGTGGCTT CGGGTTTCGG CACATCATCT CGGAGCGCGA GTTCACCCGC
AGTTTTACGA TGAATCGCAA GATCAAGGTC GCCCGGGAAG AAGCCAACGC CGATGTGATG
GTCGGCATCG ACACCGGCTG CATCACCACC ATGGACAAGA ACCAGTGGAT CGGCAAGGCC
CACGACATGA ACTACAGCAT TCCCATTGTC GCCGACGTCC AGCTCGCGGC CCTGGCCTGT
GGTGCCGATC CCTTCAAGAT CGTGCAGTTG CAGTGGCATG CTTCGCCCTG TGAAGATCTG
GTGGAAAAGA TGGGCATCAG CTGGGACAAG GCCAAGGCCG ATTTCCAGGA TTATCTCAAG
CAGGTGGAAC AGGGCAATGT GGAATACCTC TACAACCCCG AACTGGCCAC CAATCAAAAC
ATCAATATGA AAGCGGGCGC TTAA
|
|---|
| Protein sequence | MSDNSTQQGV AGHGAFFQDT NLSANEAEAA TAWVRSHVDR RTMDLGERMD DVRDHMWQLE
KEGEIIVHRL TDQHKPVEVD TLYGWKKRIP TNQFWHHKSC GQCGNIPGYP TSILWFMNKF
GMDYLDETDQ TSCTAWNYHG SGIGNVESLA AVFLRNFHQA YVSGKQHGFE NGHFYPLVHC
GTSFGNYKEI RKYLIESAEL REKVKKILGK LGRLVDGKIV IPEEVVHYSE WLHVMRNRIA
SELQTIDMSN IRVTNHAACH YYKMVAEDAV YDNTVLGGNR TAVGTSVAQA LGAQVIDYST
WYDCCGFGFR HIISEREFTR SFTMNRKIKV AREEANADVM VGIDTGCITT MDKNQWIGKA
HDMNYSIPIV ADVQLAALAC GADPFKIVQL QWHASPCEDL VEKMGISWDK AKADFQDYLK
QVEQGNVEYL YNPELATNQN INMKAGA
|
|---|
| |