| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2179 |
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| Symbol | |
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| ID | 6878170 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2161123 |
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| End bp | 2163897 |
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| Gene Length | 2775 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | 642924335 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1150] Heterodisulfide reductase, subunit C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.787998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000127376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTATTC ATGAAAAAAC ACTGATCGAT CCCGATCGGA TTTTGCAGCA CGATCACCTG
GTAATAGACG GGGTGGACGT TTCAGGTTCC TGGAACACCA TGATTACCCC CCGCACGCTG
ACGGACTACG AAGAGCATTT TGAAGAGATC ATCCAGAGTT ACAGCGGTGG CGAGAACGTG
CACCGTTGCT GGCAGTGCGG CTCCTGCACG AATTCCTGCA CCATGTATGC GCAGAATGTG
GATTTTAACC CGCGTTACTG GATTTATCTG ATTCGCTTGG GCCTGAAGGC CGAGTTGATG
AAAGATAAAG ACATTATCTG GCAGTGTGTT TCAGGGCCCC GTCAAAGTCG CCTGATATGA
CAGCAGGCGT TTTGTGCCGC TCATTTTGGT GATGGCTTAA GGTACGGCGA TGGTGGAAAT
GGTGCATTTT CAGGCCGTTT TCGGTGAAGC ATGGTGAATT CGGTGATCGG CGGACGTGCG
GCTTCCTCCG GCGCATCTCC CGGATGGACA ACGCTTGTGG TGGCGACTCA GTAACCGAAC
TGGCGGAGTG TTTTGCGAGC GCTGGCGGCG AAGTCACGGC CAGCCTGGGC GATGTTTTTC
ACCCCGATGA GACGCAGGAT GCTCATGGCG AGGCCACGTA GAGTCGCCAT CATATGTGGT
CCGTTTTCGG TCCGGATTTG AGAGAGGTCT TCGTGATAGG TGGTATCGCG GACATGATGG
TTGCGGTTTT CGATCTCCCA ATGGCCCCGG GCGATGCCCA GCAGATTTTC AGGAGTCGTC
CGATCTTTGG TGAGGCTGGT GAGTCCGAAA GCGCAATCTT CACGAAGGGT GCCGTCCTTC
ATGTCAATGG TGACCCGTTG AATCAGAAAA GCTTGGCCGA GATGGGGGAA GTCGATGCCG
GTCGCCTGGG TGGCGACGGT GATTTTCCGG TGTTCAAACC GGCCATGAGC GATATCGGTG
GTCTCAGCGC TGAGGGGGGA AATCGCCCCA AGGGAGGCAT ATCAGGCTGT TGCGGAGTTT
TCGCTGATTG CCTTTGACGG CGGTGAAGAG ATAATCGGCC TTTTTGTCTT CAACGAGGAA
TCGAGCGGTC TTTCGCTGGG TATGCAGAGC ATCGGCGGTG ACGACCTTGT CCTGGATGTC
GACGTCTTTG AGCAGGCTGC GCAGCTCCGG GATTTCGTTG GTTTTCCGGG CGATTTCTTT
TTGTGCAATG GTGGCTCCCT GGCCGTGCAT GAAAGCGCTG AGGAGATGGA CCTGGGACCC
ATCTTCCCGA ACCGCGCCTT TGAGCACTTT GCCATCGACA GCCACGGCTT CAAATCCGGC
GATACCCAGC AGCCAGGCAC CGATAGCGGC ATCCAGTGCC GTGACGTTGG CGCCTTGCAG
GACGCGACGC AGGGTCGGTT CGGAAGGCGC CACATAGCGT TGCGTCCTGG GATTGAATCG
GGCGCGGATA CGCTTCAGTT GCGCTTGGGT CAGCCGGGCG GCCCACTCGG CCATCGCGAT
ATAGCTTTGG GCCTGGGTGA GGACGGCGGC CACGGCTATG GTCAGAATGG CCGGGAGAGG
ATGCTGCTTG CCCAGACGGC TGCGGGCATC GGGCAGGCGA AAGAAAATTT GGCGCAAGCC
TTCCATTTGC GCATCGCTCA GGGTGACGGT TTGCATAGGG GTTTTCGTCC ATTCGGATTG
TGGCTGCGGC TGGGCAAGCC AGATACGCGC CTGGGGGTGA AGGGGATAGA GCAGAAGCCG
TTTGGGCTGA CCGTGGTAGA CATAGCCTGC GCCGGGACGG CGGGCAAAGC CCTTGGTCCA
GCCGACGTCC ACCCAGTTTG CGGCCCGGTA GCAGGCGCCA GTAAAACGAG GCGATTCCAC
GAAGGTCTCG GCCAGCACGA TGGGGTGACC GTAGACCGAC TGCCAGTCAG CAGAAAGTCG
GCGGAGGTTC AGGGAAAGAA TACGGGAAGC CAGGTTGGGA AAGGACTCCC TCGGCAGGAT
CAGAAAGCGG GCATTATTGG CGATGAGGTG CAGGCGCTGG CGGCGCAAGA CCCAGGACCA
GCCGATCCAC TGCTCCCGCG CCTGACACTG GTAAGCGGCG GCCTGCCAGC CGAGGAGCGC
TACCCAGCGG TCATCCAGCG TGGCCACGTA GCGCAGGGTG CGTCCCGCCA TTGTGCGGAA
GCCGCGATAA TGATGCGCTT GCATCAGGGT ATTCCAGCGT TCCCGCTCTG TGGGCAGGAT
GGGCCGCACC TCAATACGGT GCAGGCTGGC TTGCTGATGT GATGTGAGCG TTGAGGCTTC
CATACGGTAA AAGTTACCGC ATCTGGCCTC GGAGGTCCAT AGAGGGCCTT TGTATTGCTA
CATCATCAAC TTATGCCTAA GGTTGACATG GCCCTGCAGT GTGTTTCGTG TAACAAGTGC
ACCAATATCT GCCCCAAGGA CGTCCGTCCC GAAGGTGTGA TGAAAGCCAC CGCCCACTGG
ATGGAAGAAA ATGGTCTGAC CCCCAAGACC CTTTCCACTC ATTTTGATGA AGAATTTACG
CATCAGTGCA TCGAATTCGG GCGTATCGAG GATACCGAAG TCATGGTGGG GTTCTTCAAA
CGTGCCGGGC AACCCTTGGT CCAGGCCTGG ATCGTGGAGT TTGGCAAACG CCTGACCAAG
CACATGCCCT TGGGTCAGTT GACCAAAATG GGCATGAATG TGGTGTTCCG TCCCAAGACC
AAATCCTGGG GTAAAACCGG TGAAGTCCTC GCTGAATACG TGAAGGCACA GAAGGAGGCC
GCGCATCATG GCTAA
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| Protein sequence | |
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