Gene Lferr_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2173 
Symbol 
ID6878164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand- 
Start bp2156491 
End bp2157561 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID642790032 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_002220584 
Protein GI198284263 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID[TIGR00545] lipoyltransferase and lipoate-protein ligase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.679039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value0.000000000726509 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAACGT ATAACGCCAA GGACTGGCTC GTGGTCGATA CGGGCGTGCG CCCGGCCGAC 
GAAAATATGG CCTTGGACAA GACGTTGCTC CTGGCAATGT CCGAAGGACA GATTCCCAGC 
ATTTTCCGTT TCCTGCGCTT TGAGGAATCC GCGCTGGTCG GTTATCACCA ATCACCGGAG 
CAGGAACTCA ACCTGGAGTT CTGTCGTGAG CAGGGGATCG CCGTGCAGCG TCGTCTTACC 
GGCGGCGGCG CACTGATTTT TGATCCCACC CAGATAGGCT GGGAACTGGT TTGTCGGCGG 
GACGCGCTAC CCCAGGGCGA TATGGCCTCG CTGTCGCAGA GAATCTGTGA AGCGGCGGCG 
GCTGGCTTAT CGCTTCTTGG GGTGAGCGCA CGGTTTCGCC CGCGCAACGA CATCGAGGTG 
GAAGGGCGGA AAATTTCGGG TACCGGCGGG ATTATGGATG GCAATGTGCT GCTCTTTCAG 
GGGACGGTGC TGGTCGATCT GGATATTCCG CGGATGTTGC GCGTACTGCG GGTGCCGCTG 
GAGAAACTGA ATGCCCATGC CATCTCTTCG GTGGCGGAAC GGGTGACCAG CTTGAAGGCC 
TTGTTGGGTA AAGCGCCGGA GTTGACGGCG GTACAGAAGG CCTTACTGGA TGGTTTCCGC 
GCGCATTTGG GGCTGTCTTT CGTCCGGGGC GACCTGCCGG ATGCCGTGGC CGCGCTGTTG 
CCGGAGGCAT TGGCGGAGGT GCGTGACGCG GACTGGCTTG GCATCAACCG CCGCGCGCGC 
GACGATATGC CGCTGCGTAA AGCGACCTTG CGCGCCCCCG GTGGCACGCT GCAAGCAGAA 
ATGCTCTGGG ATAGTTATGG GAACCGAGTG CGGCAGGTTC ACTTCAGCGG TGATTATTTT 
GTCCAGCCCC GGCGCGCTAT CGTCGATCTG GAGGCGGCGC TGCGTAATGT CCATCTGAAC 
GACGTGGACG GTGTTATCGA GGGATTGTTC GAGAAGCAGG CTGTCGATGG CTTCGGCTTA 
CAGCCGGAGC ATTTCGCGAC GGTATTGCGG ATGGCGGCAA AAGACGCGTG A
 
Protein sequence
MTTYNAKDWL VVDTGVRPAD ENMALDKTLL LAMSEGQIPS IFRFLRFEES ALVGYHQSPE 
QELNLEFCRE QGIAVQRRLT GGGALIFDPT QIGWELVCRR DALPQGDMAS LSQRICEAAA 
AGLSLLGVSA RFRPRNDIEV EGRKISGTGG IMDGNVLLFQ GTVLVDLDIP RMLRVLRVPL 
EKLNAHAISS VAERVTSLKA LLGKAPELTA VQKALLDGFR AHLGLSFVRG DLPDAVAALL 
PEALAEVRDA DWLGINRRAR DDMPLRKATL RAPGGTLQAE MLWDSYGNRV RQVHFSGDYF 
VQPRRAIVDL EAALRNVHLN DVDGVIEGLF EKQAVDGFGL QPEHFATVLR MAAKDA