| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2172 |
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| Symbol | |
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| ID | 6878163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2155433 |
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| End bp | 2156494 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790031 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_002220583 |
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| Protein GI | 198284262 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.328813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000712182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAACCCTT TAGCCATAGA TGTACTGGTG ATTGGCGCCG GTCCGGCCGG CGCGGCGGCA
GCGCGTGCCG CTGCGGGCAA AGGCCTTACG GTGATCTGCG TGGATCGTCG TGCGGAGGTC
GGCGTCCCGG TGCAATGCGC CGAGTTTGTC CCCATGCCGC TCTTGCGTAC GGTGCATGAA
ACGGATTCGC GGGTGCAGGA CGTGGCAGGG ATGTTGACGG TGCTGCCCTC CGGGTTGCAG
CATCACAGCG TTTTCCCTGG CATCATGATT GACCGGGCAC GTTTCGACCA GGGACTGGCA
AAGCTGGCGC AGGCAGCCGG TGCTCAGCTT GAAACGCGTT GCCAATTCCT CGCCTGGGAT
GGCGAAGTGG CCCGCCTGCG GCGCGGCACC GGAGAGGCAT TCACCGTGCG CCCCCGCCTG
CTGATCGGCG CCGACGGGCC ACACAGTCTG GTGGCGGAGG CCGTGGGCTT GCCGCATCAA
GAGGTCGTTT ATACCCGTCA ATATACGGTG CCATTGCTGC GTCCCTATGC GGATACGGAT
ATTTTTCTTT CGGATGCTTT TCCGGGAGGC TATGGTTGGT TGTTTCCCCG TGGGCCGGTG
GCCAATCTCG GATTGGGTGC GGATCGGCAT TTTGAGAACA ACCTTAAATT GCCGCTGGAG
CAGTTGCATC GGCAGATGGT GGCGCGTGGC ATCATCGGCG AAGCCGTCCT CGGGCGTACC
GGTGGCGCGA TTCCCGTGGG TGGCATTCGA CCGATGGTGC GTGGCAACGT GGTGCTTGTC
GGAGACGCGG CGGGGCTTAC CCATCCCATC ACGGGGGCGG GTATCCCCGC TGCGGTGATC
AGTGGTGAAG GCGCAGGATT GGCCGCTGCT GGTTATCTGG CGGGCGACGG GGACGCGTTG
GAGAGCTACG CAGAAGATAT GCAGGATCAG TTTGGTCCGG CCTTGGCGCG GGCCGTGCAG
CGAAGAAAAT CTTTGGAAGC CGTGTGGCGA CAGCCTGCGG CCCAGGAAGA CAGGGTGATG
CGATCCGGCT GGATCGCCTT TGATGAATAC TACGCCGCCT GA
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| Protein sequence | MNPLAIDVLV IGAGPAGAAA ARAAAGKGLT VICVDRRAEV GVPVQCAEFV PMPLLRTVHE
TDSRVQDVAG MLTVLPSGLQ HHSVFPGIMI DRARFDQGLA KLAQAAGAQL ETRCQFLAWD
GEVARLRRGT GEAFTVRPRL LIGADGPHSL VAEAVGLPHQ EVVYTRQYTV PLLRPYADTD
IFLSDAFPGG YGWLFPRGPV ANLGLGADRH FENNLKLPLE QLHRQMVARG IIGEAVLGRT
GGAIPVGGIR PMVRGNVVLV GDAAGLTHPI TGAGIPAAVI SGEGAGLAAA GYLAGDGDAL
ESYAEDMQDQ FGPALARAVQ RRKSLEAVWR QPAAQEDRVM RSGWIAFDEY YAA
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