Gene Lferr_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2168 
Symbol 
ID6878159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2151164 
End bp2152171 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID642790027 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_002220579 
Protein GI198284258 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00545206 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000520925 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGTCCA TTCGTCTGCT CCATCTGGGG AAGCTCGGTC CCGAGGCGCT GCATCGCGCT 
TATGCCGGCT TGGCGGAGGC GCAGGGGGAG CCGGACATGC CCATTCTGTT GCTGGCGCAG
TCCGACGCCC ATCTGAGTCT GGGCGCCGCC CAGGGGCCGG GCGCGGAACT GGACCGGCGG
GCTTGCGAGC AACTGGACAT CCCGGTGTTG CGGCGGCCCC TGGGGGGTGG CGTGGTGTGG
GTGGACCCCG GCCAGCTGAA TTACTTCTTC ATTTTCCCCG CCGCGGCGGG AGTCCGCCGC
GCACCGGAGT TGTTTGACCG GATTGCCCCC TGGGTGCTTG CCGTACACGC CCATTTTGGC
CTGGAGGTGG AGGTGCGGGG TGGGCAGGAC TTCTGGTGCC GGGGGCGCAA GATCGGGGGC
ACCGGGGCGG CTTCCATCGG GCATAGTCTG GTGCTGGGTG GCAGCTTTAT CCTGGAGGCC
CAGTGGACAT CTTTTGCGGA TTGCGTGGCT GCCCCTTCGG CGGGTTTTCG CGCATGGCTG
AAGGAGGCGC TGGAGGAGGA CTTAGGTAGC TGGTCGCGGT TGCTGGGCCG CGTGGTGGGC
CCGGAAGTGG TGCTGGATGC CTGCCCGGCG CTGCTCCATG CGGCAGGCTG GGATGTTGTC
GTAACAAGGC CTACAGAGGC TGAAAGACGT GCCATGACGC AGGTGGAGCT GGAAGATGTG
GACTGGGAGC AGCCGGTCCG TCGTCGGGTG CGTGCCGGGA TCAAGCTCAA GGCGGGGGCT
TTCCTGACGG AACAACACTG GCCTGATGGC CACTGGCTGC GGGTGTGGAC GGAAAACGGC
ACCTTTCGGC GCATCGCTGG TTCTGCCTGG TCGGCAGGGC AGGGGGATAC GCTGACCGGC
CTGCAGCCCG GTTCGGAGAG GTTTGACGAA CGCTTGCGGG AAATGGCCGG CGCCGGGGCC
GCGCTCTGGG GCGAAAGACT ATCGGAGACG GCGGTCTGGG CGGATTGA
 
Protein sequence
MASIRLLHLG KLGPEALHRA YAGLAEAQGE PDMPILLLAQ SDAHLSLGAA QGPGAELDRR 
ACEQLDIPVL RRPLGGGVVW VDPGQLNYFF IFPAAAGVRR APELFDRIAP WVLAVHAHFG
LEVEVRGGQD FWCRGRKIGG TGAASIGHSL VLGGSFILEA QWTSFADCVA APSAGFRAWL
KEALEEDLGS WSRLLGRVVG PEVVLDACPA LLHAAGWDVV VTRPTEAERR AMTQVELEDV
DWEQPVRRRV RAGIKLKAGA FLTEQHWPDG HWLRVWTENG TFRRIAGSAW SAGQGDTLTG
LQPGSERFDE RLREMAGAGA ALWGERLSET AVWAD