Gene Lferr_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2155 
Symbol 
ID6878146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2139970 
End bp2140722 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID642790014 
Productpeptidase C26 
Protein accessionYP_002220566 
Protein GI198284245 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000159832 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATGATA CCCACCCCTC AGCACCACCC GTTATCGCAC TGAGTGCCTA TGAGCGCAAC 
GGGGAGGCCT TTTCCCTCGC CCCTCAATAT GCCGCCGCCG TTTGTCAGGC GGGTGGGTTG
CCCGTCCTCT TTCCGCCTCA GTGCCCCGAA GCCCAGGTCA TCCTGTCGCG CTGTGACGCA
CTCGTGCTTA CCGGCGGCGG CGACATCTCT CCCGATTTTT ATGGCGCGCC GTGCGGCAAC
AGCACCCACG CCGTACACCG GGATCGCGAT GCCGCCGAGA TCGCTCTGGC GCGGGAAGCC
ATCGCCCGGG GTATCCCGGT ACTCGGCATC TGCCGCGGCC TGCAGATCAT CAACGTGGCG
CTGGGCGGCG ACCTGCTCCA GGACCTGCCC ACCAGCATCG GCACTCGCAT CTGCCATCGC
AACGCCGAAC ATGACCCCGT CCTGCATGAG GTCATCGTCC TGCCGGACAC GTTGCTGAGA
GGCATCGTCG GGCAGGATAC CCTGGAGATA TCCTCCTGGC ACCACCAGGC CATCGCGAAT
ATGGCCCCCG CGCTACGCAT CAACGCCATC GCCGAAGATG GTGTCATTGA AGCCGTGGAC
ATGCCCGACA ATCCGGACGT CTTCGCCGTC CAGTGGCACC CGGAACATAC CGCCGCCGGT
GACCCGCACC AACAGGCCCT GTTTGCCTGG CTGGTACAGC GCGCCGCTCG GCGCGTGGCG
CGCTGGACGG GACACGGCGC GACAAAAAAT TAG
 
Protein sequence
MDDTHPSAPP VIALSAYERN GEAFSLAPQY AAAVCQAGGL PVLFPPQCPE AQVILSRCDA 
LVLTGGGDIS PDFYGAPCGN STHAVHRDRD AAEIALAREA IARGIPVLGI CRGLQIINVA
LGGDLLQDLP TSIGTRICHR NAEHDPVLHE VIVLPDTLLR GIVGQDTLEI SSWHHQAIAN
MAPALRINAI AEDGVIEAVD MPDNPDVFAV QWHPEHTAAG DPHQQALFAW LVQRAARRVA
RWTGHGATKN