| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2144 |
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| Symbol | prfC |
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| ID | 6878135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2127850 |
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| End bp | 2129469 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642790003 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002220555 |
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| Protein GI | 198284234 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.280372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00257154 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTAT CCCCTGTTGC TGCGGCTCCG GCCAATGCTT TTACCGACGC CATTCGGCGT
CGCCGTACCT TCGCCATCAT CTCCCACCCG GATGCCGGTA AGACTACGCT TACCGAAAAG
CTCCTGCTCT TCGGGGGTGC CATTCAGCTC GCGGGGACGG TCAAAGCGCG TAAAAGCAGT
CGTCATGCGA CCAGCGACTG GATGGCCATT GAAAAGAGCC GCGGTATTTC GGTGGCCAGT
TCGGTCATGC AGTTCGAGTA TGACGAACAC GTCATCAATT TGCTGGACAC GCCGGGTCAT
CAGGACTTTT CCGAAGATAC CTACCGGGTG CTGACAGCCG TAGATTCGGC ATTGATGGTG
ATCGACGGCG GCAATGGCGT CGAGGCGCAG ACCATCAAGT TGCTGGAGGT CTGCCGTCTG
CGCGATACCC CCATCATCAC CTTTATGAAC AAGTTCGACC GCGAAAGCCG TGACCCGACG
GAATTGCTGG ATGAGGTGGA ATCGGTGCTC GGCATTCGGT GCGCCCCCGT CACCTGGCCT
ATCGGCATGG GCAAGCGTTT CCGCGGGGTG TATCACCTGC TACGCGATGA AGTGCTGGTC
TTCGCTGCGG GGGAGGAGAC CCGGGAGCAG GCGGTGGAGC GGATTGCCGG GATCAATAAC
CCGGAGCTGG ACCGCCGCTT TCCCGAAGAA ATGCCCGAGT TGCGGGAGCA GGTGGAATTG
CTGCGTGGCG CCTCCCACCC CTTCTCGCTG GAGGAATTTT TGCAGGGACA GCAGACGCCG
GTGTTTTTCG GCTCCGCCAT CAACAACTTC GGGGTGCGGG AATTGCTGGG GGCGCTTATC
GACTGGGCAC CTTCGCCGCG CCCCCGTCCT ACTACCGGTC GGACCGTGAT GCCCGAAGAA
GAGGCCTTCA GCGGTTTTGT ATTCAAGATT CAGGCGAATA TGGATCCTCA GCATCGCGAT
CGGGTGGCCT TTCTCCGGAT CTGCTCCGGG CATTTCAAAC GTGGTATGAA AATCAGACAG
TTGCGTCTGG GGCGGGACAT CCAGGTGCAT AATCCTATTA CTTTCCTGGC GCAGGAGCGC
GAACTGGTGG AGGAGGCCTT TGCCGGTGAC ATCATCGGCT TGCATAATCA CGGCAGCATT
CAGATCGGTG ACAGTTTCAG TCAGGGCGAA GTGTTGCAAT TCACCGGGAT TCCATACTTC
GCGCCGGAGT TGTTCCGCAG GGTGCGCCTG CGGAACCCGC TCAAGGCCAA GCAACTGCAA
AAAGGCTTGC AGCAACTGGC GGAAGAAGGC GCAACCCAGG TCTTCAAACC GCTGCATGGT
GGGGATATGA TCCTGGGTGC GGTGGGCGTA CTGCAATTTG ATGTGGTGGC GGAACGGCTG
AAAACCGAAT ATACGGTGGA CGCGATTTTT GAGACGGTGA CGGTGCAGAC GGCGCGCTGG
ATTCAGTGTG CTGATCCAAA AATACTCGCC GAATTTACCC GAAAGCATGA AGAGCAGCTT
GCGGAAGACG CGGGGAATCG CCTCGCCTAC CTGGCACCTT CCCGGGTTAA CCTGGACCTC
ACCATGGAGC GCTGGCCGCA AATCGTGTTT CATGCTACCC GGGAGCATGC GGGATCATAA
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| Protein sequence | MSLSPVAAAP ANAFTDAIRR RRTFAIISHP DAGKTTLTEK LLLFGGAIQL AGTVKARKSS
RHATSDWMAI EKSRGISVAS SVMQFEYDEH VINLLDTPGH QDFSEDTYRV LTAVDSALMV
IDGGNGVEAQ TIKLLEVCRL RDTPIITFMN KFDRESRDPT ELLDEVESVL GIRCAPVTWP
IGMGKRFRGV YHLLRDEVLV FAAGEETREQ AVERIAGINN PELDRRFPEE MPELREQVEL
LRGASHPFSL EEFLQGQQTP VFFGSAINNF GVRELLGALI DWAPSPRPRP TTGRTVMPEE
EAFSGFVFKI QANMDPQHRD RVAFLRICSG HFKRGMKIRQ LRLGRDIQVH NPITFLAQER
ELVEEAFAGD IIGLHNHGSI QIGDSFSQGE VLQFTGIPYF APELFRRVRL RNPLKAKQLQ
KGLQQLAEEG ATQVFKPLHG GDMILGAVGV LQFDVVAERL KTEYTVDAIF ETVTVQTARW
IQCADPKILA EFTRKHEEQL AEDAGNRLAY LAPSRVNLDL TMERWPQIVF HATREHAGS
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