| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2140 |
|---|
| Symbol | |
|---|
| ID | 6878131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2126002 |
|---|
| End bp | 2126484 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642789999 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_002220551 |
|---|
| Protein GI | 198284230 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0134441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTC TGAAGATTGG TGAGGCGGCA AGCCTGCTCA ATACTTCAAC CCGCACGCTT
CGCTTCTATG AGGAGCAGGG AATCCTGGCA CCGGTGAAGA CGGCAAAGGG TGTGCGTCTG
TACACAGACG ATGACATCGA GCTCATCCGC GTAGTTCAGC ACCTGGCTAC CCTAGGTGTC
GCGTTGCGGG ATATTGCCGA ACTTGCGACC ATCCGTTCCC ATAGCCAGAC CGGCCATCAG
GCGAGTCATA AGGTATTCGC CTTGCTTGAA GAATTGCGCC GAAGGGTGGA ATGGAAGAAG
AAGGAATGTG AGCTCGTGCT GGAACAAATT GCTACGACTG CTCGACTCGT GAAACGGTGT
TTCGGTTGCG AGAATCCGCC GACACATCTC GGGTGCGAGC AGTGCCCTGT CGCCAGCAAC
GTCGGCGACT CACGCTTGCT ACAGCTGATT TGGGACAAGG ACACGCCCAG GAGGGTGTCA
TGA
|
|---|
| Protein sequence | MKPLKIGEAA SLLNTSTRTL RFYEEQGILA PVKTAKGVRL YTDDDIELIR VVQHLATLGV
ALRDIAELAT IRSHSQTGHQ ASHKVFALLE ELRRRVEWKK KECELVLEQI ATTARLVKRC
FGCENPPTHL GCEQCPVASN VGDSRLLQLI WDKDTPRRVS
|
|---|
| |