Gene Lferr_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2139 
Symbol 
ID6878130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2125383 
End bp2125760 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content57% 
IMG OID642789998 
Producthypothetical protein 
Protein accessionYP_002220550 
Protein GI198284229 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0135911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC AAAACGCTGC TGACCTCGTC ATCATCCTGA TTACTGGTCC CGAAAATCCC 
AAGCGCCTGC CTTCTGCCTT TTTCCTCGCG GCTACTGCGG CAGCGGCAGA GCAAAACGTT
GTCATGTACT TCACCGGCCC AGCGACGGAA TTGCTAAAAA AGGGAGTATC CGAAACGATT
TATCCACTCA CCGGCGGCAA GAGTGTAGCG GATTTCATCA AGCTGGCGGA AGACAATGGT
GTCCGGATCA TCGGCTGCGC CCAATCCCTG GACCTCGTCG GCATGACCGT AGAAGACCTT
GCCCAGCAGT TGCCGATGTT GACGCCGGGG CAAGCATTAC CGGCGCTGGC CACGGCCAAG
CGCATCCTGA CGTGGTAA
 
Protein sequence
MSEQNAADLV IILITGPENP KRLPSAFFLA ATAAAAEQNV VMYFTGPATE LLKKGVSETI 
YPLTGGKSVA DFIKLAEDNG VRIIGCAQSL DLVGMTVEDL AQQLPMLTPG QALPALATAK
RILTW