Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2132 |
Symbol | |
ID | 6878123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2119232 |
End bp | 2119843 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789992 |
Product | TniB family protein |
Protein accession | YP_002220544 |
Protein GI | 198284223 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.521965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0287257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACC TTACTCATAT TCATCCGGAA TTCCGCCATA TTTTGGGCAT GTCGGATAAG GACCGCATGG CATTTCTCGA CGAGCCGCGC TGGATAGGTT ACGCCCAGGC TAATCGCCTT TTGGATAACT TGCGCAGTTT AATGGAAAAG CCCGTGCGCC CACGTATGCC TAATCTGTTG ATCGTTGGTG ATTCCAACAA TGGCAAGACA ACGGTTATTC GGCGTTTTCA GAAGTTGCAT GGAGAGGGCT ACGTTAATGA GGATGCGGAA CCCGTCAAAC CGGTTATTGT AAGCGAAGCG CCGCCCAGCG CGGACGAAAA GGGGTTGTAT ATAGCGATCC TGGAGCGTTT CTGGACACCG TACCGAGCGA CGGATTCTGC TTCTAAGCTG CGCTACCAGG TGGTTCATCT GATGCGAGAC TGCCATGTGC GTATCCTGGT TATCGACGAA TTTCACTCTC TCCTGACGGG GACGGTGACT AAACAACGCG AGGTCATGAA CGCCATCAAG CTGCTATGCA ACGAATTGGC GATCCCCATC GTTGGCGTGG GCATCAGAGA GGCCGTCCGG GTTTTGCACA CGGACCCACA GCCAGGGCCA TGTCAACCTT AG
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Protein sequence | MMDLTHIHPE FRHILGMSDK DRMAFLDEPR WIGYAQANRL LDNLRSLMEK PVRPRMPNLL IVGDSNNGKT TVIRRFQKLH GEGYVNEDAE PVKPVIVSEA PPSADEKGLY IAILERFWTP YRATDSASKL RYQVVHLMRD CHVRILVIDE FHSLLTGTVT KQREVMNAIK LLCNELAIPI VGVGIREAVR VLHTDPQPGP CQP
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