Gene Lferr_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2100 
Symbol 
ID6878091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2093274 
End bp2093897 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content59% 
IMG OID642789964 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_002220516 
Protein GI198284195 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAG ACATCAAAAC CGCGCTGTTG CTGTTCCTGG TTCTGGCCGT AATGACCGGT 
CTGATCTATC CCCTGGCGAT GACGGGTATC GGCCAGGTCG TGTTTCCCCA TCAGGCCAAC
GGCTCTCTCA TTCGCCAGCA TGGGCGGATC GTGGGTTCCA GCCTCATCGG CCAGTATTTC
CGTGAACCGC AGTACTTCTG GAGCCGTCCT TCGGCGACTT CACCGGTGCC TTACAATGGC
GCCGGGTCCG GCGCCTCCAA TCTGGGTCCG AACAATCCTG TTCTGGCACA GCACGTGGCG
GCGCGGATCA AGGCCATCAA GGCCGCGGAT CCCGCTGAGA AAGGCCCGGT TCCGGTGGAC
CTCGTGACTT CTTCCGCGAG TGGTCTGGAT CCCGACATCA GTATTGCGGC AGCACTCTAT
CAGATCCCGC GCATTGCGCA GGCTGGTGGT ATTGATATCG TGACATTGCG CCACTTGGTC
AAGGAGAACA CCACAGAACC CCTGCTGGGT TTCCTCGGCG AACCCGTGGT CAATGTGGTG
AAACTCGACC TCGCGCTGCA TGACCGATAC GCCGCCGCGC ATGGAGCAAC AAGATCTCCG
CTCACGAAAG GAGCGAAATC ATGA
 
Protein sequence
MIKDIKTALL LFLVLAVMTG LIYPLAMTGI GQVVFPHQAN GSLIRQHGRI VGSSLIGQYF 
REPQYFWSRP SATSPVPYNG AGSGASNLGP NNPVLAQHVA ARIKAIKAAD PAEKGPVPVD
LVTSSASGLD PDISIAAALY QIPRIAQAGG IDIVTLRHLV KENTTEPLLG FLGEPVVNVV
KLDLALHDRY AAAHGATRSP LTKGAKS