Gene Lferr_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2058 
Symbol 
ID6878049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2059463 
End bp2060218 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID642789928 
Productcytochrome B561 
Protein accessionYP_002220480 
Protein GI198284159 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAA CAACGGATAA CCGTTATATC CTGCACCCTG TCTGGGACCC GCTGCTGCGG 
GCACTGCATT GGTGGATGGC GCTTGCCATG ATGGCGCAAT TCACCTCAGG CGCGACCCTC
CTGGCCCTGG GTAATGACAT GTCCGACGCC CTGATGGGGA AGATCGACAT CATCCATTAT
GTCGGCGGCT ATGCTTTCGC CGCCGCGCTG GTGGTGCGCA TCCTCTGGCT CTTTGTCGGC
CCGCCGACGG CGCGCTGGCG CGACCTCCTG CCCCTGACGT CAGCCCAGCG CCGTATCTGG
CGGGAAACCC TCTCCTGTTA TCTGAGCGGC TTCCGCCGCC CGATTTCCCC CTATCGGGGG
CATAACGCTT TCGCCGGCCC GGCCTACCTC GCCTTTTTCC TGATTGCCGT GGTACAGATC
GCCTTGGGTA TCAGCCTCTC GCTCATGCCG GACAGTGAAG CGATGAACTC CCCGTTGATG
GTGATGCATG AATGGGGGTT CTTTCTGCTG CTTGCCTTCG TCATTGTCCA TGTGGCGCTC
GTGATCGCGC ACGAGGTTGC GGGCCGCCAC GGTTTGATAT CGGCCATGAT CCACGGTCAC
AAGGGGTTCA CCGAGTCGGA ATACCAAGCC CTTCATGCCG ATTGGGACGC TGCGTTCAGT
GTCCAGGCGG ACCCAGGCGG ACCGAGCGGC GGGACGGAAG GGCTGGACGA CATGACTTCA
AATAACGGAG ATGACACGAA AAGCAGGCAT GAGTGA
 
Protein sequence
MNSTTDNRYI LHPVWDPLLR ALHWWMALAM MAQFTSGATL LALGNDMSDA LMGKIDIIHY 
VGGYAFAAAL VVRILWLFVG PPTARWRDLL PLTSAQRRIW RETLSCYLSG FRRPISPYRG
HNAFAGPAYL AFFLIAVVQI ALGISLSLMP DSEAMNSPLM VMHEWGFFLL LAFVIVHVAL
VIAHEVAGRH GLISAMIHGH KGFTESEYQA LHADWDAAFS VQADPGGPSG GTEGLDDMTS
NNGDDTKSRH E