Gene Lferr_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2044 
Symbol 
ID6878035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2048818 
End bp2049480 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID642789914 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_002220466 
Protein GI198284145 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.307112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGC AGGATGAAGT GGCCCGCCGG GACCAACGGA AATTCGACAC CCTCCTGCGT 
CAGGCCCACT TCCGGAATCA CAAAACCCTG GAAGACTTCG CCTTTGACCG GTTACCGAAC
CTGAACCGCT CTCTGGTGCA TGATCTGGCT ACGGGTCGCT ACCTGCAGGA GCAGGCACCT
GTCCTGATCG TCGGGCCCTG TGGCACCGGC AAGAGCCATC TCGCCCAGGC GCTGGGGCAT
TGTGCCATTC GCCAGGGGAT GGACGTGCTC TTTATCACCC AAGGTGATCT GGTGGGCTCC
CTGCATGCAG CGCGGGCCAC CGGTGGCTTT GACCGGCGCT TCCGCCAACT CGCCAAAGTG
ACGCTACTGA TCATCGACGA CTTCGGCCTC AAACCCATGC GCCCGCCCCA TGATGAGGAC
TTCCACGATC TCATCGCCGA ACGCTATGAG CGAGTCTCCA CCATGCTGAC CAGCAATCTC
GACTTCGCCG AGTGGGGGGA CGTCTTCCCG GCCAACCGCA TGCTCGGAGT GGCCACCCTG
GATCGGCTAC GCCACGGCGC CTATCGACTG ATCCTGGAAG GCGATAGTTT TCGCGCCCCA
CGACCGCTCC CGGAATCCCC GAAAAACACC ATTGCGAAAG GAGCCAAAAA CACCCATTCT
TAA
 
Protein sequence
MLLQDEVARR DQRKFDTLLR QAHFRNHKTL EDFAFDRLPN LNRSLVHDLA TGRYLQEQAP 
VLIVGPCGTG KSHLAQALGH CAIRQGMDVL FITQGDLVGS LHAARATGGF DRRFRQLAKV
TLLIIDDFGL KPMRPPHDED FHDLIAERYE RVSTMLTSNL DFAEWGDVFP ANRMLGVATL
DRLRHGAYRL ILEGDSFRAP RPLPESPKNT IAKGAKNTHS