Gene Lferr_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2042 
Symbol 
ID6878033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2045999 
End bp2046475 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content54% 
IMG OID642789912 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_002220464 
Protein GI198284143 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAG AAGGCATCCT CGAAAAAGGT TTTGTTACCA CCAGTATTGA TACAGTAGTC 
AACTGGAGCC GCACCGGCTC GCTCTGGCCC ATGACTTTTG GGCTCGCCTG TTGCGCAGTC
GAAATGATGC ATGCCGGTGC TGCGCGTTAT GACCTGGATC GTTTCGGCTT GCTTTTTCGC
CCCAGTCCGC GCCAGTCTGA TCTGATGATT GTGGCCGGGA CCTTGGTCAA CAAAATGGCT
CCGGCTTTGC GTAAGGTCTA CGATCAGATG CCGGAACCGC GCTGGGTCGT TTCCATGGGA
TCCTGTGCCA ATGGCGGTGG TTATTACCAC TATTCTTACA GCGTAGTGCG TGGCTGTGAC
CGCATCGTTC CCGTTGATAT TTACGTGCCG GGCTGTCCGC CGACGGCGGA AGCGTTGATT
TTTGGCCTGA TACAGCTACA GAAAAAAATC CGTCGCACTA ATACGATAGC CAGGTGA
 
Protein sequence
MGIEGILEKG FVTTSIDTVV NWSRTGSLWP MTFGLACCAV EMMHAGAARY DLDRFGLLFR 
PSPRQSDLMI VAGTLVNKMA PALRKVYDQM PEPRWVVSMG SCANGGGYYH YSYSVVRGCD
RIVPVDIYVP GCPPTAEALI FGLIQLQKKI RRTNTIAR