Gene Lferr_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2032 
Symbol 
ID6878023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2035446 
End bp2036309 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID642789902 
Productintegrase, catalytic region 
Protein accessionYP_002220454 
Protein GI198284133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA CCCGTATCGA CTCCCCCCAA CGGGATCGCT GGGCGCTATT GCGCTTTGCG 
ATCATTGGCC CCTTGCTGGC GGCACCACCC GCTCCGGGAG AACTCGCTCC GGCACTGGAG
GCGCTGGCCG CCCGGATCTG GCGCCATCCG CTCACCGGGG AACCGGTCCA GTTTGGATTC
TCCACCCTGG AGCGCTGGTA TTACCGGGTA CGCGCGGCAG AGAATCCGGT CCTCCCCCTG
CGCAACCGGT TACGCAGTAA CGTCGGCCAG TTCCCGAGTC TGACGCCGCT GGCGATCGAG
ACGCTGACCA TCCAATATCG GGAGCATCCG GGCTGGACAG CCCAGTTGCA CTACGACAAT
CTGAAGGCTG CCCTGCAGGG GCAGGATGTG ACGCTTCCGT CCTACCCGAC GATCCGCCGC
TATCTCCAGG CACAGGGCCT GTTCCGGCAG TCGCGACCGA AACGCGCCAC CGCCGGCGCT
ATCGCCGCCC GTGATCGTCT GGAACGCCTG GAAGTGCGCA GCTATGAGGT AGAACATACC
GCCGCCCTCT GGCATCTGGA TTTCCACCAT GGCTCCCGCC AGGTGCTGAC CCGTGCTGGC
GCCTGGGAGA CACCCATGCT GCTGGGGATC ATCGACGATC ACTCGCGGCT GCTCTGCCAC
CTGCAATGGT ATCTGGACGA AACCGCCGAG AGTCTCATCC ACGGCCTCTG CCAGGCCTTC
ATGAAGCGCG GCCTGCCACG GGCGCTGATG ACGGACAATG GTGCCGCCAT GGTGGCCGAG
GAAACCACCA ACGGGCTGGC CCTGCTGGGG GTGCTGCATC AGGCGACACT GCCTTATAGT
CCGTACCATT ATGTGGCGCT TTAA
 
Protein sequence
MMKTRIDSPQ RDRWALLRFA IIGPLLAAPP APGELAPALE ALAARIWRHP LTGEPVQFGF 
STLERWYYRV RAAENPVLPL RNRLRSNVGQ FPSLTPLAIE TLTIQYREHP GWTAQLHYDN
LKAALQGQDV TLPSYPTIRR YLQAQGLFRQ SRPKRATAGA IAARDRLERL EVRSYEVEHT
AALWHLDFHH GSRQVLTRAG AWETPMLLGI IDDHSRLLCH LQWYLDETAE SLIHGLCQAF
MKRGLPRALM TDNGAAMVAE ETTNGLALLG VLHQATLPYS PYHYVAL