Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2031 |
Symbol | |
ID | 6878022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2034373 |
End bp | 2035371 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789901 |
Product | integrase family protein |
Protein accession | YP_002220453 |
Protein GI | 198284132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACG TGACCCTGCT TGGCCCCTGG ATACGGCGAT TTCTACTGGA GTATCTGGTA CGAGAGCGCA ATCTTTCGAT AAATACCCAG CGCAGCTATC GAGATATGCT GTCCCTTTTT CTGCCCCACG TGAGTAAACA ACTCAACAAA TCCGTGGACC GATTAACGGT ATCTGATCTG TCGGCAGACC TTATCCGTCA ATTCCTTAGT GATATTGAGG AAAGCCGCCA CTGTCTCGCC GCCACCCGCA ATCAGCGCCT CGGCGGCCTG CACGCGTTGG CTCGATTCAT TGGTGAAAAT AGTCCTGAGC ATATCGAGTG GTGTTCACAA ATCCGGCTGA TTCCTTTTAA AAAAACGGCA TATCCAGGCA TTACCTATCT CGAAAAGCCA GAAATGGACG CCCTTTTAGA ATCTCCAGAT CGCCAGACCC CTCAAGGCCA ACGTGATTAC GCCTTATTAC TGTTTCTCTA CAACACTGGG GCGCGTGCCA GTGAAGCTGC CGATCTCAGG ATCGTTGATG TGGATTGGCA TGCTCAATGC GCCCACATTA TCGGCAAAGG TAACAAGCGG CGTACCTGTC CATTGTGGCC GACCACTCTG GATCAATTGC GTGCGCTAGC AACGCAACGT GGGTTGGATC AACGAGTTTT TTTAAATCGC AACGGCCAAC CCATCACACG CTTTGGTATC CATACGATGG TCGAACGACA TGCTGCTAGG GCTTGTGTGC AAGTGCCATC AATGAGTACG AAGCAGGTCA GTCCACATGT GATCCGCCAC AGCACGGCAA CCCACCTTTT ACGTGCTGGC GTGGACATCA ATACCGTCCG AGCCTGGCTG GGACACGTTT CGCTCACTAC GACCAACATC TACGCTGAGA CTGACCTCGA GACTAAAACT CGTGCGTTGG CGACATGTGC TCCGCCCACA GCAGAGGGGA TGGCAACGAA ACATTGGCGT CAGCAGCCGG ACCTGATGGC CTTCCTCCAC GGCTTATAG
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Protein sequence | MTDVTLLGPW IRRFLLEYLV RERNLSINTQ RSYRDMLSLF LPHVSKQLNK SVDRLTVSDL SADLIRQFLS DIEESRHCLA ATRNQRLGGL HALARFIGEN SPEHIEWCSQ IRLIPFKKTA YPGITYLEKP EMDALLESPD RQTPQGQRDY ALLLFLYNTG ARASEAADLR IVDVDWHAQC AHIIGKGNKR RTCPLWPTTL DQLRALATQR GLDQRVFLNR NGQPITRFGI HTMVERHAAR ACVQVPSMST KQVSPHVIRH STATHLLRAG VDINTVRAWL GHVSLTTTNI YAETDLETKT RALATCAPPT AEGMATKHWR QQPDLMAFLH GL
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