Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2005 |
Symbol | |
ID | 6877996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2005111 |
End bp | 2006289 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642789877 |
Product | anticodon nuclease |
Protein accession | YP_002220429 |
Protein GI | 198284108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.924608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.799191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGG GCCAGCCCTT CGCCGACTTG CCAAAGCTGG CCGCCCATTT GCGCGGCGAG CTGGAGAACA AGAAAGCCAT CCTGCTTTAT GCCTACAACG GCACCGGTAA GACGCGGCTG TCGATGGCCT TCAAGGACAT CGGCAAGCAA GGTGATGCTC GCGACACACT CTACTTCAAC GCCTTCACCG AAGACCTGTT CCATTGGGAG AATGACTTTG AAGGCGATAA CGACCACAGG CTCACACTCA ATGCGGCGTC GCGCTTTTTC GCCGGCTTAG CCGAGTTGGA AATGGACAAC CGCATCCGCC CGCTGCTGCA ACGCTATGCG GATTTCGATT TCCGCATCGA CTACGAGAAA TGGGATGTTG TTTTTTCGCG AAGAGTCAAA AATGAGAACT ATGTTCCAGG CTCTAAAAAA CTCATGCAAA GGTTTGCGTT TGAGGAAAAG ACCCATATCA AGGTCTCGCG CGGTGAAGAA AACATCTTTG TCTGGTGCTT CTTCCTCGCC ATCGTGCAAC TGGCGCTAGA TGGTGCGGAG GCTTATCAGT GGGTGAAATA TGTTTACATC GACGACCCGA TTTCATCGTT GGATGAGCAC AACGCAATTG CGGTAGCCAA CCATCTAGCG CAATTGCTCA AACGGCCGGG CAGTAAGCTC AAGACGGTGA TCTCGACGCA CCATACCTTG TTCTTCAACG TGCTGTGCAA CGAATTTAAA GGGAAGGCGT TCCGATATTT TCTGAGAAAT GCCCCCACTG GCAGTTATTC GCTAGTAGAT ACATCTGCCA CGCCATTCCT TCACCATTTG GCGAGCATTA TTGAGTTAGA TGAAGCACAA AAGAGTGGTG CACTCTATAC ACATCACTTC AACATGATGC GCAGAGTGAT GGAGCAGACT TCCATCTTCT TGGGGCTTGA GGACTGGGCC GAATGTATCA GGGTGGCAGG CGATCTAGAC GAAGCGCTGT CCAAGCGGAT GATTGACCTT ATGAGTCACG GCGATTATTC GCTTTACGAG CCACGAGAAA TGATGGAAGA GAATAAAGCG CACTTTCGGA GAATTTTCCG CGCCTTCCTG AATCGCTACC CCTTCAATCC GAAACTGTTT CCTGTAGCAC CCGAGGATGA CAATGTCGGC GAAGAGCCGA CTCTCTTGCA ATGGGGAGAA AACCGATGA
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Protein sequence | MKPGQPFADL PKLAAHLRGE LENKKAILLY AYNGTGKTRL SMAFKDIGKQ GDARDTLYFN AFTEDLFHWE NDFEGDNDHR LTLNAASRFF AGLAELEMDN RIRPLLQRYA DFDFRIDYEK WDVVFSRRVK NENYVPGSKK LMQRFAFEEK THIKVSRGEE NIFVWCFFLA IVQLALDGAE AYQWVKYVYI DDPISSLDEH NAIAVANHLA QLLKRPGSKL KTVISTHHTL FFNVLCNEFK GKAFRYFLRN APTGSYSLVD TSATPFLHHL ASIIELDEAQ KSGALYTHHF NMMRRVMEQT SIFLGLEDWA ECIRVAGDLD EALSKRMIDL MSHGDYSLYE PREMMEENKA HFRRIFRAFL NRYPFNPKLF PVAPEDDNVG EEPTLLQWGE NR
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