| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1993 |
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| Symbol | |
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| ID | 6877983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1992710 |
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| End bp | 1993387 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642789864 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_002220417 |
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| Protein GI | 198284096 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0837698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCAGA ATGGCGGACA GGTGATGGAT CTGAATTCGG ACGGCATGGT GCGGGATCAG
ACCCGTGTTG AAGAGTGGAT TAACAGTCTG CTGCATGGCG CAGGCGCGGT CGGTGCCGCG
CTGGTTTTTG TGCTGTGGAT CGTTGGCGCA GGTCTCCACA GTACCCCTCT CGCGGTAATC
ACCATCAGTA TATTCGTGGT GACCATCGTG ATGCTGTACG GCGCTTCGAC CATTTATCAC
ATTCTGCCGT CGGGGCGACT TAAACGGGCT TTCCAGTTGG TGGACCGATC CGCGATCTAT
CTCCTTATTG CCGGCACTTA CACCCCGGTG ACGCTGATGG TGCTCCATGG CTCGTGGGGT
TGGGTGCTGC TGACCGTGGA GTGGGGCCTT GCGGCGCTGG GCATCACTCT GCTGGCCATG
GCAGGGACGC GCGCGCAATC GATTTCTCTC TGGCTCTACC TCCTCATGGG CTGGCTGGCG
GTATTCGCCG CCGTGCCGCT CTATAATTCC GCACCCGGCT GGTTTTTGTG GTGGCTGGCC
GCTGGCGGGC TGGCCTATAC CATAGGCGTC CTCTTTTTTC TGCTGGATCG CTGGAAATAT
TTCCATTCCA TCTGGCATGT TTTTGTCATC GCGGGTACGG CGCTGCAGTT CTGGGCTATT
CTTCAATATG CTGGCTGA
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| Protein sequence | MMQNGGQVMD LNSDGMVRDQ TRVEEWINSL LHGAGAVGAA LVFVLWIVGA GLHSTPLAVI
TISIFVVTIV MLYGASTIYH ILPSGRLKRA FQLVDRSAIY LLIAGTYTPV TLMVLHGSWG
WVLLTVEWGL AALGITLLAM AGTRAQSISL WLYLLMGWLA VFAAVPLYNS APGWFLWWLA
AGGLAYTIGV LFFLLDRWKY FHSIWHVFVI AGTALQFWAI LQYAG
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