| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1990 |
|---|
| Symbol | |
|---|
| ID | 6877979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1989087 |
|---|
| End bp | 1990394 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642789860 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_002220414 |
|---|
| Protein GI | 198284093 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.246521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGC GTTACACGCG CCCGGAAATG GGTGCCTTAT GGACGCAGGA TGCCAAATAT
CAGGCCTGGC TCGACGTGGA GCTGGCAGCT TGCCGGGCAC TGGCGGCGCG GGGGCAGATT
CCTGCCGACG CCTTGGCGGA GATCGAGGCG AAGGCGGCTT TTGATAGCGC CCGTATTGCG
GAAATCGAGC TGGAAGTCAA ACACGACGTC ATTGCCTTTC TGACGTCCGT GGCCGAGCAT
GTGGGGCCGT CCAGCCGCTT CATCCACCTT GGCCTGACCT CTTCGGACGT GGTGGATACG
GGCTTTGCGC TGCAGTTGAA ACGTTCCGGG GCACTGCTGC TGGAAGGGAT GGATCGCCTG
TATCAGGCAC TGGCGCATCT GGCCTGGAAG CACAAGGACA CGGTGATGAT CGGCCGCTCC
CATGGCATTC ACGCGGAGCC CATCACTTTT GGTCTGAAGG TGGCGGTGTG GTGTGCTGAA
GCTCAGCGTA ACCGGCAACG CCTGATCAGT GCCATAGATG CTGTGTCTGC GGGTATGTTG
TCGGGGGCCG TCGGAACGTT CGCCAACATC GACCCCGATG TCGAAGAAGC GGTCTGTGCG
GATCTGGGGT TGGCCCCCGA ACTGGCCAGT ACGCAAGTCA TTTCCCGGGA CCGTCACGCC
GAGTTTTTCG GCACACTGGC GGTGATTGCC GGGTCCATCG AGAAGATCGC CGTGGAAATC
CGCCATCTGC AACGCACCGA GGTGCTGGAA GCGGAGGAGC CGTTCACCGC CGGGCAGAAG
GGCAGTTCCG CCATGCCCCA CAAGCGCAAT CCTATCCTCT CCGAGAATCT GACGGGTCTC
GCCCGCCTGC TGCGTGGTTA TGCGGGCATG GCGCTGGAGG ACATCGCCCT CTGGCATGAG
CGCGATATTT CCCACTCCAG TGTGGAGCGG GTGATCGGCC CCGATGCCTG CATCGTCATG
GACTTCATGT TCCATCGGGC GAGCGGCCTG CTGGAACGGC TCGTGGTTTA TCCGCAGCGG
ATGCTGGATA ACCTGCACAA GATGCATGGC CTGATTTTCT CACAGCGGGT GCTGCTGGCG
CTCACCGGGA AGGGCATGCT GCGCGAGGAC GCATACCGGG TGGTGCAGCG CAACGCAATG
CAGGTCTGGG AGGCGAATGC GGACTTCAAA TCTCTCCTGG CAGCGGACCC ACAGATTCAG
CCCTATCTGA GTGCGCCAGA ACTGGCTGAG TTGTTTGATC TTGGCTATCA CACCCGCAAT
GTGGACGCCA TTTTCGCTCG CGTTTTTCCG GAAGGACAAC CCCGATGA
|
|---|
| Protein sequence | MIERYTRPEM GALWTQDAKY QAWLDVELAA CRALAARGQI PADALAEIEA KAAFDSARIA
EIELEVKHDV IAFLTSVAEH VGPSSRFIHL GLTSSDVVDT GFALQLKRSG ALLLEGMDRL
YQALAHLAWK HKDTVMIGRS HGIHAEPITF GLKVAVWCAE AQRNRQRLIS AIDAVSAGML
SGAVGTFANI DPDVEEAVCA DLGLAPELAS TQVISRDRHA EFFGTLAVIA GSIEKIAVEI
RHLQRTEVLE AEEPFTAGQK GSSAMPHKRN PILSENLTGL ARLLRGYAGM ALEDIALWHE
RDISHSSVER VIGPDACIVM DFMFHRASGL LERLVVYPQR MLDNLHKMHG LIFSQRVLLA
LTGKGMLRED AYRVVQRNAM QVWEANADFK SLLAADPQIQ PYLSAPELAE LFDLGYHTRN
VDAIFARVFP EGQPR
|
|---|
| |