| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1984 |
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| Symbol | |
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| ID | 6877972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1979647 |
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| End bp | 1981182 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642789853 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002220408 |
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| Protein GI | 198284087 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.241117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCAAG AGAGCCCGGC TTCACGTCTT ACCATTACGG TCGCGGTCAT GCTGGCGGTA
GTCATGCAGG TGCTAGACCT GACCATTGTC AACGTGGCGT TGACCTACAT GCGCGGCTCC
CTGCATGCCA ACAGCGATCA GATCACCTGG GTGCTCACCA GTTACATGGT CGCCAATGTG
ATCATCCTGC CCCTTACCGG GTTACTGGTG GAACGCTATG GTCAACGCAC CATCATGCTT
TGGAGTGTGG TCGGCTTTGT GATTTCTTCC GTGCTCTGCG GGCAATCCCA TAGTCTGGTG
GAAATCGTGC TCTGGCGTTT TCTGCAAGGC ATTTTTGGTG CTTCTCTGGC CCCCGTAGGG
CAAACCATCA TGCTCGGCGC CTACCCGTCC GACAAGCGTG GTCAGGCTAT GGCCATTCTC
GGCATGGGCA TCATGCTGGG TCCGATCCTG GGCCCTACCC TGGGTGGCTA TCTGACGGAC
ACGCTCAGTT GGCGCTGGGT GTTCTATGTG AATATTCCCT TTGGTATCCT CGCGTTCCTG
CTCATGCGGA CCATTCCCGA CGGCGGCAAG AGCACCACTC CCCGTCCAGT GGACTGGACA
GGCTTCACGC TGATGGCCGT AGGGCTGGGC AGCCTGCAAG GCATGCTGAG CCTCGGTGAT
CAGGATAACT GGTTCAGTTC GCGAACCATC ATCATCCTGA CCATCTGCGC CATTTTGGGT
ATGCTTTTTT TCGTCTGGCG CTCTCTGAGC ACACCCTATC CCGTAGTGGA CTTGCGTCTG
CTCAAAGACC GGAATCTGTC CATCGGTAGC ATGGGGATCG GCATATTCGG TCTCGCCCTC
TTCGGAACCA TGGTGATTCT GCCTATCATG CTGGAGGGTC TGATGCGCTA TGAGGCATTT
ACTGCGGGAC TGGTGATGGC ACCGCAGGGT ATCGGTGCCA TGATCGCCAT GATGTTCGCG
GGGCGCATGC TGGGACGTGG CGTCAATCCA CGCAATATCG TGTTGGTGGG CATCGTTTTC
GGAGCATTCG GCACTTATCT CACCACCCTC TATAATCTGG ATATCAGCAT GGCCTGGGTA
ATCTGGCCCA GTTTCATTCG CGGTATCGGT TTTGGCCTGG TGACAATCCC GCTCTTCACC
CTGGCTTTTA CGACCCTCGA AAAAGCCCAA CAGGCGGAGG GCTCGGGCAT TTTCAACCTG
ATGCGGACCT TGGGCGGAAG CATCGGTATC GCCATCGTTT CGACGGTGAT GACTCAGGAA
ACGCAGGTGG GCTGGAATCA AATGGGAGGG CTCATCAACC CGTTCAATCC CGCTTTTCAC
CGGTATCTTA CGGCAGCAGG CCTGACTCCG GGGCCGACGA CTTGGCATCT GCTGGGTAAC
GTCATCGTTT ATGACCAAGC GAACATGCGC GGAACGCTGG ACGCCTTTAT GCTGGTTTTT
TATGGCTTTC TGGTTTTGAT TCCGCTGATC ATGTTCCTGA AGAGGCCACC CGGCAGCTCA
GCAGGAGTGA CACAGGTAAC GCACTTCGGC GAATGA
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| Protein sequence | MAQESPASRL TITVAVMLAV VMQVLDLTIV NVALTYMRGS LHANSDQITW VLTSYMVANV
IILPLTGLLV ERYGQRTIML WSVVGFVISS VLCGQSHSLV EIVLWRFLQG IFGASLAPVG
QTIMLGAYPS DKRGQAMAIL GMGIMLGPIL GPTLGGYLTD TLSWRWVFYV NIPFGILAFL
LMRTIPDGGK STTPRPVDWT GFTLMAVGLG SLQGMLSLGD QDNWFSSRTI IILTICAILG
MLFFVWRSLS TPYPVVDLRL LKDRNLSIGS MGIGIFGLAL FGTMVILPIM LEGLMRYEAF
TAGLVMAPQG IGAMIAMMFA GRMLGRGVNP RNIVLVGIVF GAFGTYLTTL YNLDISMAWV
IWPSFIRGIG FGLVTIPLFT LAFTTLEKAQ QAEGSGIFNL MRTLGGSIGI AIVSTVMTQE
TQVGWNQMGG LINPFNPAFH RYLTAAGLTP GPTTWHLLGN VIVYDQANMR GTLDAFMLVF
YGFLVLIPLI MFLKRPPGSS AGVTQVTHFG E
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