Gene Lferr_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1981 
Symbol 
ID6877969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1978018 
End bp1978329 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content55% 
IMG OID642789850 
Producthypothetical protein 
Protein accessionYP_002220405 
Protein GI198284084 
COG category[S] Function unknown 
COG ID[COG3461] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.11308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACG AAGCGTTGCA TGAATCCCCC GAGTCTCTGT CTCCGGAAAC CATAGATATC 
CACCGAGCCA TTTCTTCGCT CATGGAGGAG TTTGAGGCGG TTGACTGGTA CCAGCAGCGC
GCGGATGCCT GCACCGATCC TATTCTCAGG CAGGTGCTGG AACACAACCG AGATGAAGAA
ATTGAACATG CTGCTATGAT CCTCGAGTGG CTGCGCCGCA AAATGCCGCG TCTGGATAAG
GAATTGCATG CGTATCTGTT CAGCGAAGGC TCGATCGCCG GCCACGAAGC CAGGATGGTA
GGACGGGACT GA
 
Protein sequence
MAHEALHESP ESLSPETIDI HRAISSLMEE FEAVDWYQQR ADACTDPILR QVLEHNRDEE 
IEHAAMILEW LRRKMPRLDK ELHAYLFSEG SIAGHEARMV GRD