Gene Lferr_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1974 
SymbolrpsU 
ID6877962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1972927 
End bp1973142 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content57% 
IMG OID642789843 
Product30S ribosomal protein S21 
Protein accessionYP_002220398 
Protein GI198284077 
COG category 
COG ID 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.118176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACTG TTCGTGTCAA AGAAAATGAG CCTTTCGAAG TCGCGTTGCG GCGTTTCAAA 
CGTTCCTGCG AAAAGGCAGG AGTCCTTACC GAGGTAAGGC GTCGCGAATT CTACGAAAAG
CCCACGGAAG AGCGCAAGCG TAAGGCCGCT GCTGCCCGCA AGCGGGCGTT GAAGCGCATG
CGTCGTCAGT CCATGCGTCT GGTCCGGCTC TACTGA
 
Protein sequence
MPTVRVKENE PFEVALRRFK RSCEKAGVLT EVRRREFYEK PTEERKRKAA AARKRALKRM 
RRQSMRLVRL Y