| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1973 |
|---|
| Symbol | |
|---|
| ID | 6877961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1972481 |
|---|
| End bp | 1972927 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642789842 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002220397 |
|---|
| Protein GI | 198284076 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1610] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0436471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTAC GTGAGCGCAT CCAGGAGGAT ATGAAGTCTG CCATGCGCGC CCGGGAAGCC
GAGCGTCTTG GGACTATTCG TATGCTCCTG GCGGCAATCA AACAGCGGGA AATTGACGAG
CGCCGCGAGC TTGATGATGC TGAAGCGTTG CGCATCGTGG ACAAGCTGAT CAAGCAGCGC
AAAGATTCTG CCAGTCAGTT TATTGCCGGT GGGCGTCCGG ACCTTGCCGA AAAGGAAGAA
TCAGAAATTT CTTTTCTCGC AGTTTATCTG CCGGAGGCGC TGTCACCCGG CGAGATTGAC
GGGCTGATCA GCGAGGCGAT GACAGCGGTG GCGGCCAGCG GACCTAAAGA TATGGGTAAG
GTACTTACCT TTCTGCGCCC GCAGATGCAG GGGCGTGCGG ATATGGCCGT GGTGGCGGAT
AAAGTGAAGG CCCGCCTCGG CAGTTGA
|
|---|
| Protein sequence | MTLRERIQED MKSAMRAREA ERLGTIRMLL AAIKQREIDE RRELDDAEAL RIVDKLIKQR
KDSASQFIAG GRPDLAEKEE SEISFLAVYL PEALSPGEID GLISEAMTAV AASGPKDMGK
VLTFLRPQMQ GRADMAVVAD KVKARLGS
|
|---|
| |