| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1972 |
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| Symbol | |
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| ID | 6877960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1970145 |
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| End bp | 1972469 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789841 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_002220396 |
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| Protein GI | 198284075 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01069] MutS2 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.656834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGG CCGGGGTTGC TCCTTGGCAG GACAGCTTCT GGCGGGCTCT GGATGCCAGT
GATGTGCAGA GCGCGTGGTC ACAGCATTGT GGCCACATCT ATGGCCGCAG ACATGTTGCG
GCGACTACCC CCTGGGTGCC GCTTGCGGAA ATCCATGATC GTTTGAATTG GTTGGCCTGG
TTGTCGCAGC GGTTTTCCGC CGGTTTTCTT CTTCCCGTTT CTGATCTCCC CGATATCGAT
GCTCTGCTGG TTCTGGCACA GCGCCCTGGT GCCGTGCTCA GCGGGAGAGA TTTGCGCGCG
GTGCTCGATG TGCTGACGGC GCAGAAGGGC TATGCCGCAG CTTTGCGCGA GACTCGGGAT
GCCTTGACCG GGCTGGCAGG CGAGCTTGAT CCCCCGGTGA CCTTGTTGCG CCGTCTCGGC
GTGGCGTTGG ATGAGGAGGG TGAGCTCCTG GATACGGCGA GTGCGGATCT CGCCCTCCTG
CGCCAGCGCT TGCGAATCAG CCGCAACGAA TTGCAGCGTT TTCTGCAGGG CTTTCTGCGT
AATCGAGACT GGCAGGAATA CTGGCAGGAT CAGGTCATCG TGCAGCGTAA TGAGCGTTAC
GTACTCCCGC TCAAAGCTAG CCATAAAGGG CGTATCAAGG CGATCGTCCA TGACCGGTCG
GCAAGTGGTG AGACTCTTTT TGTGGAGCCG CTGGCGGCCG TCGATCTGAA TAATCAACTG
GTCCAGGACC GGCGTGCCGA AATTCAGGAG CAGGAGCGCA TTCTTCGTGC CCTGAGCGCA
GCGGTAGGGC TGGAAGTGCC GGGCATCGTC GCCGCCCTGC GGCATATTGG CCGGCTGGAT
GCGGTACGGG CGGGACTGGA ACTGGGGGAT GCCTGTGGCG GGATTTTGCC CAAGGTCGAT
GCGGCTGCGG CATTTGATCT GCGGGCCCTG CGTCATCCGC TGCTTTGTCT GCGCCATCCG
GGGCAGGTCG TGGGTAACGC CCTGCGTCTC GGGGCGGACG CGCAGCAACT GGTCATTACC
GGCCCCAATA CCGGCGGCAA GACGGCTATC CTGAAAGCAC TCGGACTCAA TCATCTGATG
GCCTACATGG GATTGCCGGT AACTGCGGAA GGTACATTGG GTTATTTCCC GAAGTGCTTT
GCGGTCATCG GCGACGCCCA GGATATCCAC ACGGATCTTT CCACTTTTTC GGCGCAGGTA
CAGCGTCTTC GGGAAGTGCT GGAGCATGCC GACGCCCACA GTCTCGTGCT TCTCGACGAA
CTGGGCAATG GCACCGACCC GCGGGAAGGG GGCGCGCTGG CTCAGGCGGT CGCAGAGGCC
TTGCTGGCGG CCGAATGCTG CACACTGCTC ACGAGCCATC TGGAAGTGAT GAAGCGTTAT
GCCCTGAGCC ATGCGGGTGT AGCCCTGGCG GGTATGGGCT TTGATGCAGA GTCTTTGAAA
CCCACCTACC GTCTGCTTTG GGGTGTAGGC GGCGCGAGCC AGGGTCTGGT CATCGCCCGG
CGCGTGGGGA TGCCTGCACC ACTGATGAAC CGCGCCGAGG CACTCTATGC CGATGACCGC
GAGAACTGGG AACGTTGGGA AGCGCAACGG GAAACCCTAT TGCAGGCCGC CCGGCAGGCT
ATGGATGAGG CCGTACTGGC GCGTGACGAA GCCACCAGTG TGGCCCGCAG CCTGGAACGC
GAACTGGAAG CAGCGAGGCA GGAGCGTGAC AAAGCCGCCG CCGCCGCCCG CGCCGAATGG
GAAGATATAC TGGCAACGGC GCGCCAGCAG GTGCGGCAAG CCATTGCCGC GCTCAAGTCC
GGGAGGGATA CCCAGGCGGC AACGGCGGCT TTGCAACGTC TGGAAGTCCC CTTCCGGGCG
GAGGAGCAGC AAGTGGACAG CCTGCCCGCG GTGGGGACCA GGGGTCTGTT CCTGCCACTC
CGGCAGGTGA CCCAAGTGCT GCGTGCGGAT CCCGCACAAC ACAGGGTGCA GATTCAATTA
CGGGGCAAGC AGTTGTGGGT GCCCGCCGCA CAATTTGCCG TGGACGCCGC GCTGCAGATC
CCAAAAGAAG CAGGCAGCAC CCAGTATGCC ACCCCCGACG ATCATCCCTG GCGTCTGGAT
TTGCGCGGAC AGCTTCGGGA AGACGCCCTG GCGGCGCTGC GTCGTCATGT GGATGGCGCC
GTAGCCGCCG GTCGTCGACA GGTCCAGATC CTGCATGGTA AGGGCAACGG GGTGCTCGCA
GAAATGGTGC GCGAGTTTGC CGGGCAAGAC CCTCGGGTCA GCCAGTGGCG TATGGCGCGG
CCAGAGCATG GCGGTGGCGG CGTCAGCGAG TTGGAGTTAC GCTGA
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| Protein sequence | MAVAGVAPWQ DSFWRALDAS DVQSAWSQHC GHIYGRRHVA ATTPWVPLAE IHDRLNWLAW
LSQRFSAGFL LPVSDLPDID ALLVLAQRPG AVLSGRDLRA VLDVLTAQKG YAAALRETRD
ALTGLAGELD PPVTLLRRLG VALDEEGELL DTASADLALL RQRLRISRNE LQRFLQGFLR
NRDWQEYWQD QVIVQRNERY VLPLKASHKG RIKAIVHDRS ASGETLFVEP LAAVDLNNQL
VQDRRAEIQE QERILRALSA AVGLEVPGIV AALRHIGRLD AVRAGLELGD ACGGILPKVD
AAAAFDLRAL RHPLLCLRHP GQVVGNALRL GADAQQLVIT GPNTGGKTAI LKALGLNHLM
AYMGLPVTAE GTLGYFPKCF AVIGDAQDIH TDLSTFSAQV QRLREVLEHA DAHSLVLLDE
LGNGTDPREG GALAQAVAEA LLAAECCTLL TSHLEVMKRY ALSHAGVALA GMGFDAESLK
PTYRLLWGVG GASQGLVIAR RVGMPAPLMN RAEALYADDR ENWERWEAQR ETLLQAARQA
MDEAVLARDE ATSVARSLER ELEAARQERD KAAAAARAEW EDILATARQQ VRQAIAALKS
GRDTQAATAA LQRLEVPFRA EEQQVDSLPA VGTRGLFLPL RQVTQVLRAD PAQHRVQIQL
RGKQLWVPAA QFAVDAALQI PKEAGSTQYA TPDDHPWRLD LRGQLREDAL AALRRHVDGA
VAAGRRQVQI LHGKGNGVLA EMVREFAGQD PRVSQWRMAR PEHGGGGVSE LELR
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