Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1971 |
Symbol | |
ID | 6877959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1968390 |
End bp | 1970141 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642789840 |
Product | DNA primase |
Protein accession | YP_002220395 |
Protein GI | 198284074 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0427766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACT TTTCTCCCGC ATTCATTGAC GCCCTGCTGG AGCACTGTGA TCTGGTGCGT CTCATCGATA GCCGCGTACC GCTGAAGAAA AAAGGCCGGG ATTTCTGGGC CTGCTGCCCC TTTCATCAGG AAAAGAGCCC GTCTTTCTCG GTCAGTGCCG ACAAACAGAT TTATTACTGC TTTGGCTGTC ACGCCCATGG GAATGCCATC GGATTCTTGA TGGCCCATGA TCGGCTGTCT TTTCCGGAGG CGGTGAAGAC ACTCGCTGAC GAAGTCGGTG TCGCCCTGCC GGAAGACGGC CCTGCCGGAG AGCAGGAAAG TCTTCGGCCG CTGCGGGCGA TTCTCGAAAA AGCCATTGGC GTTTACCGAT CTGCCCTCGC AGAGCACCCG CCGGCGCAGG AGTATCTGCG TGGAAGGGGT TTGAGCGAGG AGATCATTGG GCGCTTCGAG CTGGGGTACG CACCGTCTGC AGCCGGGTTT CTGAGCCAGA AACTGGGCAG GGAACCGTCA TTGCGCCAGC AGTTGCTGGG CGCGGGCCTG GTGAGCGGCC GTGAAGACGG ATCGGTCTAC GACCGTTTTC GCGGGCGAGT GATTTTTCCG ATCCGCGACG GACGAGGACA GGCGGTGGGA TTGGGCGGCC GCAGTCTCGA TGGTCATGAA CCCAAATACC TCAACTCGCC GGAAAGTGCG CTCTACCACA AGGGGCGGGT GCTCTATGGT CTGCACCAAG CCAGGGAGGG GATGCGCCGA GCAGGGCGGG TGCTGCTGGT GGAAGGGTAT CTGGATGTCA TTACCCTGCA CCAGGCTGGC ATCGACTACG CCGTCGCGGC GAGCGGGACG GCCTTGGGGG ACAGCCAGAT GGAAATGCTC TTCCGGGCAG CGCACGAGGT GCTACTCTGT TTCGATGGCG ATACCGCCGG ACGTAATGCG GCCTGGCGGG CCGTGCAGAC GGCGCCGGAG CATCTGCGCG CGGGGCGTCT GCTACGGTTG CTGTTCCTGC CGGATGGCCA GGACCCAGAC TCGTTGGTGC GCGAACAGGG AGGCGCGGTG TTTGAATCAA TGCTCCCGAC CGCGCGTCCA GCCATCGATT TTTTTCTGGA GGAGTTGCAA CGCCGACACA ACCTCGCCGC AGAAGATGAG AAGGCACTTT TTCTGCATGC GGCACGCGAT TTTCTGAAAC GGGTGAGCGA TCCGGTGTTA CGGGAGGTTT ATGAACAACG GGTGCAGACG CTTTGCGGAT TGGCACCCGT CGCCCGGCGC GCGACATCGC GCGCACCGCG TAAAGCGACA TTCTCCGCTG CCGGAGGACG ATCCCTTTTT AAAACGGCTT TGCGACTATT GCTGAATTTT CCCGAAGACC CTGCCTGGCA GGCGTTGGAC CGTGATTTGC TGCCTTTCCT CTTCGACCGT GATCCCATGG CTGAAATTCT GGCAGAGGCC CTTGATATCT TGGCCAACAT GACCCATCTA AGTTCTCACG AACTATTCGC AAAACTGTCG GTACTGAAAC ATGCGGAGGC ATGCTACGCG CTGGTGATGA GCGACTCTGG CGACGAGGAA GGACAGGTGC TGATGCGGCT TGAAATTTCC GGTTGTGTGG CGCGAGTGAA TCAGCGCCTT GCTGCGGCGC GCAGTCACTT TATCAGCCGG GCCGCAGATC AGGGTGGTTT GAGTGCGCTC TCCGAGCAGG AGAGGGCTGA AGTAGTGCGT TTGTCCCGGC GCGACAGGCG CAACGGCGTT GGATCGGAAT GA
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Protein sequence | MANFSPAFID ALLEHCDLVR LIDSRVPLKK KGRDFWACCP FHQEKSPSFS VSADKQIYYC FGCHAHGNAI GFLMAHDRLS FPEAVKTLAD EVGVALPEDG PAGEQESLRP LRAILEKAIG VYRSALAEHP PAQEYLRGRG LSEEIIGRFE LGYAPSAAGF LSQKLGREPS LRQQLLGAGL VSGREDGSVY DRFRGRVIFP IRDGRGQAVG LGGRSLDGHE PKYLNSPESA LYHKGRVLYG LHQAREGMRR AGRVLLVEGY LDVITLHQAG IDYAVAASGT ALGDSQMEML FRAAHEVLLC FDGDTAGRNA AWRAVQTAPE HLRAGRLLRL LFLPDGQDPD SLVREQGGAV FESMLPTARP AIDFFLEELQ RRHNLAAEDE KALFLHAARD FLKRVSDPVL REVYEQRVQT LCGLAPVARR ATSRAPRKAT FSAAGGRSLF KTALRLLLNF PEDPAWQALD RDLLPFLFDR DPMAEILAEA LDILANMTHL SSHELFAKLS VLKHAEACYA LVMSDSGDEE GQVLMRLEIS GCVARVNQRL AAARSHFISR AADQGGLSAL SEQERAEVVR LSRRDRRNGV GSE
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