| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1971 |
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| Symbol | |
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| ID | 6877959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1968390 |
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| End bp | 1970141 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642789840 |
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| Product | DNA primase |
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| Protein accession | YP_002220395 |
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| Protein GI | 198284074 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0427766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACT TTTCTCCCGC ATTCATTGAC GCCCTGCTGG AGCACTGTGA TCTGGTGCGT
CTCATCGATA GCCGCGTACC GCTGAAGAAA AAAGGCCGGG ATTTCTGGGC CTGCTGCCCC
TTTCATCAGG AAAAGAGCCC GTCTTTCTCG GTCAGTGCCG ACAAACAGAT TTATTACTGC
TTTGGCTGTC ACGCCCATGG GAATGCCATC GGATTCTTGA TGGCCCATGA TCGGCTGTCT
TTTCCGGAGG CGGTGAAGAC ACTCGCTGAC GAAGTCGGTG TCGCCCTGCC GGAAGACGGC
CCTGCCGGAG AGCAGGAAAG TCTTCGGCCG CTGCGGGCGA TTCTCGAAAA AGCCATTGGC
GTTTACCGAT CTGCCCTCGC AGAGCACCCG CCGGCGCAGG AGTATCTGCG TGGAAGGGGT
TTGAGCGAGG AGATCATTGG GCGCTTCGAG CTGGGGTACG CACCGTCTGC AGCCGGGTTT
CTGAGCCAGA AACTGGGCAG GGAACCGTCA TTGCGCCAGC AGTTGCTGGG CGCGGGCCTG
GTGAGCGGCC GTGAAGACGG ATCGGTCTAC GACCGTTTTC GCGGGCGAGT GATTTTTCCG
ATCCGCGACG GACGAGGACA GGCGGTGGGA TTGGGCGGCC GCAGTCTCGA TGGTCATGAA
CCCAAATACC TCAACTCGCC GGAAAGTGCG CTCTACCACA AGGGGCGGGT GCTCTATGGT
CTGCACCAAG CCAGGGAGGG GATGCGCCGA GCAGGGCGGG TGCTGCTGGT GGAAGGGTAT
CTGGATGTCA TTACCCTGCA CCAGGCTGGC ATCGACTACG CCGTCGCGGC GAGCGGGACG
GCCTTGGGGG ACAGCCAGAT GGAAATGCTC TTCCGGGCAG CGCACGAGGT GCTACTCTGT
TTCGATGGCG ATACCGCCGG ACGTAATGCG GCCTGGCGGG CCGTGCAGAC GGCGCCGGAG
CATCTGCGCG CGGGGCGTCT GCTACGGTTG CTGTTCCTGC CGGATGGCCA GGACCCAGAC
TCGTTGGTGC GCGAACAGGG AGGCGCGGTG TTTGAATCAA TGCTCCCGAC CGCGCGTCCA
GCCATCGATT TTTTTCTGGA GGAGTTGCAA CGCCGACACA ACCTCGCCGC AGAAGATGAG
AAGGCACTTT TTCTGCATGC GGCACGCGAT TTTCTGAAAC GGGTGAGCGA TCCGGTGTTA
CGGGAGGTTT ATGAACAACG GGTGCAGACG CTTTGCGGAT TGGCACCCGT CGCCCGGCGC
GCGACATCGC GCGCACCGCG TAAAGCGACA TTCTCCGCTG CCGGAGGACG ATCCCTTTTT
AAAACGGCTT TGCGACTATT GCTGAATTTT CCCGAAGACC CTGCCTGGCA GGCGTTGGAC
CGTGATTTGC TGCCTTTCCT CTTCGACCGT GATCCCATGG CTGAAATTCT GGCAGAGGCC
CTTGATATCT TGGCCAACAT GACCCATCTA AGTTCTCACG AACTATTCGC AAAACTGTCG
GTACTGAAAC ATGCGGAGGC ATGCTACGCG CTGGTGATGA GCGACTCTGG CGACGAGGAA
GGACAGGTGC TGATGCGGCT TGAAATTTCC GGTTGTGTGG CGCGAGTGAA TCAGCGCCTT
GCTGCGGCGC GCAGTCACTT TATCAGCCGG GCCGCAGATC AGGGTGGTTT GAGTGCGCTC
TCCGAGCAGG AGAGGGCTGA AGTAGTGCGT TTGTCCCGGC GCGACAGGCG CAACGGCGTT
GGATCGGAAT GA
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| Protein sequence | MANFSPAFID ALLEHCDLVR LIDSRVPLKK KGRDFWACCP FHQEKSPSFS VSADKQIYYC
FGCHAHGNAI GFLMAHDRLS FPEAVKTLAD EVGVALPEDG PAGEQESLRP LRAILEKAIG
VYRSALAEHP PAQEYLRGRG LSEEIIGRFE LGYAPSAAGF LSQKLGREPS LRQQLLGAGL
VSGREDGSVY DRFRGRVIFP IRDGRGQAVG LGGRSLDGHE PKYLNSPESA LYHKGRVLYG
LHQAREGMRR AGRVLLVEGY LDVITLHQAG IDYAVAASGT ALGDSQMEML FRAAHEVLLC
FDGDTAGRNA AWRAVQTAPE HLRAGRLLRL LFLPDGQDPD SLVREQGGAV FESMLPTARP
AIDFFLEELQ RRHNLAAEDE KALFLHAARD FLKRVSDPVL REVYEQRVQT LCGLAPVARR
ATSRAPRKAT FSAAGGRSLF KTALRLLLNF PEDPAWQALD RDLLPFLFDR DPMAEILAEA
LDILANMTHL SSHELFAKLS VLKHAEACYA LVMSDSGDEE GQVLMRLEIS GCVARVNQRL
AAARSHFISR AADQGGLSAL SEQERAEVVR LSRRDRRNGV GSE
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