Gene Lferr_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1967 
Symbol 
ID6877954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1962519 
End bp1963313 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID642789835 
Productprotein of unknown function DUF347 
Protein accessionYP_002220391 
Protein GI198284070 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.785052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAG CCGCACTTAG CCCATCCAAC GAAAAGAACG CCATGCTCAA GGTACCGAAG 
ATCACCGTGT ATTTCTGGAT GGCGAAACTC CTGACCACCG CCATGGGAGA AGCCACGTCG
GATTTTCTCG TTTTCCACAC AAACCCCTAT CTGGCCGTGG TGGGTTGTGG TTTGTTATTC
CTGGCCGCTA TCTGGCTGCA GATGCGGAGC AATCAATATA CCGCACACTA TTACTGGTTT
GCCGTCATTA TGGTGAGCAT CTTCGGTACC CAAATAGCGG ATGTCACCCA TGTCGTGCTG
GGCGTTCCCT ATGACATCTC GACATCCGTT TTTCTGGTTG CCTTGATCGG GATTCTTGGC
ACCTGGAAAC TCAAAGAGAA AACTCTTTCC ATTCACAGTG TGCATACACC TCGGCGAGAG
GCATTCTATT GGGCGACCAT CGTAGCTACC TTTGCCCTTG GCACCGCCGC CGGTGACATG
ACAGCATCGA GCCTGGATTT AGGCTACCTT GGATCGGGCT TACTATTTGT CCTTTTGTTT
GGCATTCCCG TCGTTGCATA TTTCATGTTC GACCTCAATG AAATTGCCGC CTTCTGGATA
GCCTATATCC TGACCAGGCC GCTGGGGGCT TCTTTCGCGG ATTGGACAGA CAAGCCGATA
ACGTTCGGTG GCCTTGGTCT TGGCACGGGC CCGGTGAGCA TATCGCTGAC GCTGGTCATT
TTGATGCTGC TCATCTTCCT GATAATTTCC AGAGTAGATG ACCCCAACCG AGCGCAAAAG
ATAGACGTAC GCTAG
 
Protein sequence
MTTAALSPSN EKNAMLKVPK ITVYFWMAKL LTTAMGEATS DFLVFHTNPY LAVVGCGLLF 
LAAIWLQMRS NQYTAHYYWF AVIMVSIFGT QIADVTHVVL GVPYDISTSV FLVALIGILG
TWKLKEKTLS IHSVHTPRRE AFYWATIVAT FALGTAAGDM TASSLDLGYL GSGLLFVLLF
GIPVVAYFMF DLNEIAAFWI AYILTRPLGA SFADWTDKPI TFGGLGLGTG PVSISLTLVI
LMLLIFLIIS RVDDPNRAQK IDVR