Gene Lferr_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1966 
Symbol 
ID6877953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1961189 
End bp1961779 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content56% 
IMG OID642789834 
Productcytochrome B561 
Protein accessionYP_002220390 
Protein GI198284069 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA ATGCGGCATT ACTGAACAAA GAGGCACCGG ACTCAGGTGG AGATCTACCC 
GTGCGCTATG ACCGGACAAC CATCATTCTG CATTGGCTAA CCGTGGTTCT GGTCGTCGTA
CTCTTTGCCC TGGCCGAAAT CTGGGATTTT CTCGAGCATG GGGCGCCGCT CCGGAAGGAA
TTCCAGTCCC TTCATATTTC ACTGGGCATC CTGCTGACGG TGGTGCTCAT AATACGGCTG
GGCTGGCGTA CCACACGCGG CACGCGCATG CCGGCGGCGA CAAACTTGCA GGAAAGGCTG
GCGAAAGGGA TGCAACATGT GCTCTACCTC CTGCTGGCGG TACAGGTAGC GCTTGGTTTT
CTGCTGCGCT GGGCACAGGC GGAATCCTTC ACATTCTTCG GGCTCTTGTC CCTGCAGTTT
GCGACTGTCA AAAATCGCGT CCTGGAACAC ACCTTCGGCA ACTTCCACAA CATCATTGCC
TGGACCATCA TTATCCTCGC CGGTCTGCAT GCTGCGGCGG CACTGATGCA CCACTACATC
CTCAAGGATG ACACGCTGGA ACGGATACTC CCGAGAAAAA CCGGCCGTTA G
 
Protein sequence
MNENAALLNK EAPDSGGDLP VRYDRTTIIL HWLTVVLVVV LFALAEIWDF LEHGAPLRKE 
FQSLHISLGI LLTVVLIIRL GWRTTRGTRM PAATNLQERL AKGMQHVLYL LLAVQVALGF
LLRWAQAESF TFFGLLSLQF ATVKNRVLEH TFGNFHNIIA WTIIILAGLH AAAALMHHYI
LKDDTLERIL PRKTGR