Gene Lferr_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1963 
Symbol 
ID6877949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1956249 
End bp1957880 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content60% 
IMG OID642789830 
Productphosphoglucomutase 
Protein accessionYP_002220387 
Protein GI198284066 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTAT TGCAGATTGC GACCCGGCCC TTTGCCGACC AACGCCCCGG CACCTCCGGC 
CTGCGTAAAA AGGTCAAAGT TTTTCAGCAG CCGCATTACC TTGAAAATTT CGTGCAATCC
ATCTTCAACG CCATTCCCGA TCGTGCCGGG AAAACCTTGG TGCTCGGCGG TGACGGGCGG
TTTTATAACC GCGAAGCCAT ACAGATCATC CTCCGGATGG CAGCGGGCAA TGGCTGGGGC
AAGGTCGTTG TGGGCCGTGG TGGGCTCTTC TCCACGCCTG CGGTCTCTAC CGTCATCCGC
GCCCGCGGCG CCCACGGCGG CATCATCCTG AGCGCCTCCC ATAACGCGGG GGGCCCCGAC
CAGGACTTTG GCATCAAGTA CAATACGGCC AATGGCGGTC CCGCTCCGGA AAAGCTCACC
GACGCCATCT GGACCGCGAG CAGGTCCATC CAGGGCTATC AGATACTGGA CGGCGCGGAC
GTCGACATTG ACCACGCTGC CACTTTTTGG CTGGGCGACA TGCAGATAGA AGTCTGTGAC
CCGGTAGCCG AGTATGCAGA ACTGATGGCC CGCATTTTTG ATTTTGACGC GCTGAAACGA
CTCATGCAGG GGCCTTTCCG GATGCGTTTC GATGCCCTGC ATGCCATTAC CGGACCCTAT
GCCCATGAGA TTTTTGAAAA GCAGCTCGGG GCACCGGCAG GCACGGTGGT CAACGGCACC
CCCCTCACGG ATTTTGGGGG CGGTCATCCC GATCCGAATC TGGTTTACGC CAAGCCCCTG
GCCGACGAAC TCTTCGCAGA GAACGCACCC GACTTTGGCG CCGCATCCGA TGGAGATGGG
GACCGCAACA TGATCCTGGG ACGCCATTTT TTTGTGACCC CCAGCGATTC ACTCGCGGTA
CTTGCGGCAC ATGCCACCGC AATCCCCGCT TACCGTCATG GTCTCAAAGG CATCGCCCGT
TCCATGCCCA CCAGCCAGGC TGCGGATGTG GTGGCTGAGG CCCTGGGTAT CGCCCATTAT
GAAACGCCCA CCGGCTGGAA ATTCTTTGGT AACCTGCTGG ATGCGGGCAA AATCACCTTT
TGCGGCGAGG AAAGTTTTGG TACCGGGTCG GATCACATCC GTGAAAAAGA CGGACTCTGG
GCCGTATTGG CCTGGCTCTC GGTGATCGCC CATACCGGAC AACCGGTGGC GGAGATCGTC
ACCCGGCACT GGCAGCGTTT CGGGCGTCAT TACTACACCC GCCACGATTA CGAAAATCTT
CCGGCGGAAA TCGGGGAACA GATCATGCAC AGCATTGCCG CCCAATTGCC GGTGCTCCCT
GGTCAGACCC TGGCGGGACG GGAGATCCTC ATTGCGGATG ACTTTGCCTA TGCCGACCCC
ATCGACGGCA GTGTCAGCGC GCATCAGGGC CTGCGTCTGC TCTTTGCCGA CGGTGCCCGG
CTGATATTCC GCCTGTCGGG TACCGGAACC GAAGGTGCCA CCTTGCGTAT TTATCACGAG
CATCTGGAGA AAGACCCGCT GCGCCAGCAC CAGGATCCGC AACGTACCCT GCGCGATCTG
ATCCAGGTCG GCAGGAATCT CAGCCGACTC GAAACCCTCA CGGGTCGCAA GACCCCCACT
GTCATCACCT GA
 
Protein sequence
MAVLQIATRP FADQRPGTSG LRKKVKVFQQ PHYLENFVQS IFNAIPDRAG KTLVLGGDGR 
FYNREAIQII LRMAAGNGWG KVVVGRGGLF STPAVSTVIR ARGAHGGIIL SASHNAGGPD
QDFGIKYNTA NGGPAPEKLT DAIWTASRSI QGYQILDGAD VDIDHAATFW LGDMQIEVCD
PVAEYAELMA RIFDFDALKR LMQGPFRMRF DALHAITGPY AHEIFEKQLG APAGTVVNGT
PLTDFGGGHP DPNLVYAKPL ADELFAENAP DFGAASDGDG DRNMILGRHF FVTPSDSLAV
LAAHATAIPA YRHGLKGIAR SMPTSQAADV VAEALGIAHY ETPTGWKFFG NLLDAGKITF
CGEESFGTGS DHIREKDGLW AVLAWLSVIA HTGQPVAEIV TRHWQRFGRH YYTRHDYENL
PAEIGEQIMH SIAAQLPVLP GQTLAGREIL IADDFAYADP IDGSVSAHQG LRLLFADGAR
LIFRLSGTGT EGATLRIYHE HLEKDPLRQH QDPQRTLRDL IQVGRNLSRL ETLTGRKTPT
VIT