| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1958 |
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| Symbol | |
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| ID | 6877944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1951243 |
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| End bp | 1951923 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789825 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002220382 |
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| Protein GI | 198284061 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.814805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCG TTTTGATAGT GGATGATGAT CGGCGGCTTG CAGAGATGCT GCGGGAGTTT
CTTCAGGCCC AGGGCCTCGC CGTACTGCTC GCCGCCAATG GGCAGCAGAT GCGCCAACAA
CTGGCGGCGG GGCCGGTGGA TGTCATCGTG CTGGACTGGA TGCTGCCGGG GCAGGACGGC
ATCAGCCTCG CCAAAGACCT GCGCAGCAAG GCGGGACCTC CCATTCTGAT GCTGTCCGCC
CGTGGTGAGG AGGACGAGCG TATTCTCGGG CTGGAAAGCG GCGTGGATGA CTATCTGGCC
AAGCCATTCA ATGCGCGGGA GTTGCTGGCG CGGCTGCGGG TGCTGCTACG CCGCAGCGGG
AAAGACGAGG GCAGCGACAA ACTCAGCTTT GGCGACTTCT GTCTGCATGT GGCGGAGAGG
CGACTCTATC GGGGTGATGC CGAGGTCGAT GTGAATCCTG CAGAGATGGA TCTGCTCCTG
GTCTTTGCAC AGCGACCACG CCGGATACTC AGCCGCGATT TGTTACTGCA ATTGCTGGGC
GGAGAGGAAG ATGGCCGTTT TGATCGCAGT ATTGACGTCC GGGTGACGCG CCTGCGCAAG
GTGATTGAAG AAAATCCCCG ACAACCCCGC TTTTTGCAAA CCGAGCGTGG CGCCGGATAC
CGCTTCACTC CGTCCTCATG A
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| Protein sequence | MAVVLIVDDD RRLAEMLREF LQAQGLAVLL AANGQQMRQQ LAAGPVDVIV LDWMLPGQDG
ISLAKDLRSK AGPPILMLSA RGEEDERILG LESGVDDYLA KPFNARELLA RLRVLLRRSG
KDEGSDKLSF GDFCLHVAER RLYRGDAEVD VNPAEMDLLL VFAQRPRRIL SRDLLLQLLG
GEEDGRFDRS IDVRVTRLRK VIEENPRQPR FLQTERGAGY RFTPSS
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