Gene Lferr_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1955 
Symbol 
ID6877940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1948532 
End bp1949014 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID642789821 
Productphosphohistidine phosphatase, SixA 
Protein accessionYP_002220379 
Protein GI198284058 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.187267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG TGTTGGTGCG GCATGGCAAG GCGGAAGACC CGGCGGCGCG GCCATCTGAT 
CTTGAGCGGG AACTGACCAC TACAGGACGT TCGACGGTAA AGGGGATGGC GAAAGGATTG
CGACTTTGCG TGTCAGGGAA GGTGGTGATC TGGACCAGCC CTTTGCCACG TGCTCGCCAG
ACCGCCGATA TCCTAGCCAA TGCCTTTGCG GTTAAAAAGA TTCGGGAGCA CGACGCCATA
GCGGCGGGCG ATCTGGAGGT TCTCGCCAGC GATTGGCGGG ATCTGGATCC CCAGCCCAAG
GCCTTGATCC TGGTCGGTCA TCAGCCCCAT CTGGGAAACT GGGCGGAACG CCTCACGGGT
GCCGTGTTGC CGATCAAGAC CGCAGCGGCG CTGGCGGTGG ACCTGGATGA GGACAACGCG
TTGAGCGGTA TGCTGCGCTG GTATGCCCAT CCCAAGGCGC TGGCTGGCCT TGCAGACCAT
TGA
 
Protein sequence
MQLVLVRHGK AEDPAARPSD LERELTTTGR STVKGMAKGL RLCVSGKVVI WTSPLPRARQ 
TADILANAFA VKKIREHDAI AAGDLEVLAS DWRDLDPQPK ALILVGHQPH LGNWAERLTG
AVLPIKTAAA LAVDLDEDNA LSGMLRWYAH PKALAGLADH