Gene Lferr_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1948 
Symbol 
ID6877933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1942569 
End bp1942931 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID642789816 
Producthypothetical protein 
Protein accessionYP_002220374 
Protein GI198284053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTC GCGCCAGCGC CCTCCATGCC GGTCCCATGC AGGGTTATCT CGCCGTCCGC 
TCGGCGCAGT TGTGGCTGCA GACCCTGGGG CCGGCCCGGG TCCAGGTGGC CTTCTGGCCG
GAGGGACGAG AAGAGGCGCG CCGCCTCACC AAGATCGTCA CTACCAAAGC ACAGACCCAG
TTTACCGCGC TCTTGACCCT GGACGACCTT GCGCCCGGCA CCCGCTACGC CACCCGGGTG
CTGCCGGACG GCCAAGCCCT AGCCGCATTC CCGTTCACGG TACATACCCT GTCCCTCTGG
CAATGGCGCC GCCCCGGCGC ACCGCGGCAA GGTCATGTAA TGGACGTTAG CAGCCCAATG
TGA
 
Protein sequence
MPLRASALHA GPMQGYLAVR SAQLWLQTLG PARVQVAFWP EGREEARRLT KIVTTKAQTQ 
FTALLTLDDL APGTRYATRV LPDGQALAAF PFTVHTLSLW QWRRPGAPRQ GHVMDVSSPM