| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1946 |
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| Symbol | |
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| ID | 6877931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1938873 |
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| End bp | 1941710 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789814 |
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| Product | lipoprotein, putative |
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| Protein accession | YP_002220372 |
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| Protein GI | 198284051 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCA CCTTCTTATT CCTCCTATCC GGCGCCTTTG CTCTCCTGGC CGGCCCCGCC
GCAGCGCAAA GCGCAATGGA CGAGAAGGAT GGACCACCAT CCAGTGCCGG ACACCGGGAA
AGCGCAAGGG CAGAGGCAGC AGTTCTGCCC ACCGGTCAGC GTATTTCACC ACGGGCCACT
CCTGGCTCCC GGTTTTGGGA TCGCCTCATG ACCGATGGCG GCGCTGCGCC GGTCTATGCG
CGGGGTGCCG TCAGCACATT ACTGACGCCG GACGGGCATT ATTTGTTGAT CCTGACCTCG
GGATTCAAGC GGAACGCCGA CGCCCATGGC CATCCGTCAG CGCAGCGTTC CCGGCAGAGC
GTGATTATTG AGGATGTCTC CAACCCGCGG CAGCCCCAAA CCATCCAGGT CCTGCCCATC
AACAACAGCT TTTGCGGCAT GGCCCTGTCG GCGGATGGGA AAACCCTTTA TGTAGGCGGC
GGCGTCGATG ACAATGTGCT GATTTTCCAA AAAACCGGGC CCTCCGGACA GTGGCGGACC
GATGGCCATC CCATCCCTCT CGGACACCAG TCCGGCCTTG GTCTCCACGT CAAACCCCTC
ACCGCGGGCC TCGCCCTCAG CCCCGATGGC AGGCGCCTCC TCGTGAGCAA TTTCTACAAT
GATTCAGTGA GCATGATCGA CCTGGACCAG CGTCGCGTTC TCCGGGACGT GGACCTGCGT
CCCGGCCCCA GCGAAGGACG GCACGGACAG GCCGGGGGTG AAAGCCCCTT CTGGGTCGTC
ATGGATCATC GGCAGCGCGT CTATGTCTCC AGCATGCGCG ACCGTGAAAT CGTCGTCATC
GACACCGGCA ATGACGACCC GAAGATCGTC GCCCGCATCG CCACGCCGGG GAATCCCAAC
CGCCTGCTCC TGGACGAGGC CCGCCAGCGG CTCTACGTGG CCATGGAAAA CCGCGACAGC
ATCGCGGTCG TCGACACCCA AAAACTCCGG CTACAGGGCC AGGCCGGTCT GGTTCCGGGG
GAGGTGCGCC GCGCCGGGAC GCCGGGAGTT TCCCCGGGCG AAGAAAATCT GGGCTGGTCG
GCCAACGCCC TCGGCATCTC GCCCGATCAT CAGCGGCTTT ACGCCACCCT AGGCCAGATG
AATGCCATAG CCGTGCTCTC CCTGGCGGGA GCAATGCCGC ACAGCCTCGG CCTCCTGCCA
ACGGCATGGT CGCCGCAGGA CCTGGTCCCT GCGCCAGCCG GCGACGCCCT TTGGGTGATC
AACAATAAAT CCATTCCCGG AGCCAATCCG GGATATTGTT CCGGTTATCG GCATGGCTGC
ATCGCCTCAT CCCCGGTCCA GCCGAAGCCC AACCAATACA TCTTGCAACT TTCCCTTTCG
GGCCTGCAAG AGATTCCGCA TCTGGCCAAG GTGGACCTGC CGTCCATGAC CTCGGTGGTC
CTGAAAAACA ACCACTCCAC CCTCCTCTCC CACATCGATC GCCAAGTCAT GGATTTCCTG
CACCGGCATA TCCGGCACGT CATCTATATC GTCAAGGAAA ACCGTTCCTA CGATCAGGTG
CTGGGCGACC TTCCCCGGGG CAACGGCGAC CCCTCCCTCA CCGAGTTCCC CCTGGCCGTG
ACCCCCAACC AACATCGCCT CGCCCTCGAC TTTGTCCTGC TGGATCACTT TCTGGATACG
GGGGAAGTGA GCGGCGATGG CTGGGCGTGG TCCACGGCAG CCCGGGAGTC GGACATCAAC
AGCAAGATGC TGCCCAATAA TTATGCCCAA GGCGGCGGTT CCTACGACTG GGAAGGCACC
AATCGCAATG TCAACGTGGG CCTGCAGGGG GAAGAACGGC GCGCGGCCAA TCCCGACACC
CCCAAGGACC CCGATCTTCT GCCGGGGACC GCCGACGTTG CCGCACCGGA TAGCGCTGCC
GGCCGCTACC AACAAGGTTA TCTGTGGAGC GCCGCCCTGC GCCATGGACT CACCCTGCGA
AATTATGGAT TTTTTGTGGA CCTGGAACGA TATGGCGCCA GCACCAACCG GATTCCGCTA
TCCCGCCATC CCTACCAGGA AAAAATCATC CAGGCCTATC CGGCCAATCC GGGGCTCGCC
GCCCATACCG ATCCATTTTT CCGCAGCTTT GATAACGCCT ACCCGGATTA TTACCGCTAC
CGTGAATGGG AGCGGGAATT CCGCGCCTAT GAACGCAATG GCAAACTGCC CACTCTTTCG
CTCATACGCT TCATGAATGA CCATACGGGC AAATTTGGCC AAGCCATGGA CGGCGTCAAC
ACGCCGGAAC TCCAGGTCGC AGACAATGAT TTTGCCGTAG GCTTGCTGGC GGAGCGGATC
GCCCATAGCC GCTACGCCCG GGATACCCTG ATATTCGTGG TGGAGGACGA CGCCCAGGAC
GGCCCGGACC ATGTGGATGC CCACCGCAGC ATCGCCTTCG TCGTCGGCCC CTATGTGAAA
CAAGGCGCGG TGCTTTCCAC CCCCTACAAC ACCCTCAACC TGCTGCGCAC CATGGAGATG
GTGCTGGGAC TGCCGCCCCT GAGCGCCCTG GACGGCGCCG CCCGCCCGAT GGCGGATATT
TTCGACCTTC GGCAACGGCC ATGGAGCTTT CAGGCCTGCC CCTCGGGGAT GCTGCAAAGC
ACCGCCCTCG CCAGCCGCTG GCCGGCCCGA TACCGATCCT GCGGCAGCGC CCAAAACCAT
TTGCGGCCTT TGCACGACGG GAAATACTGG GCCGCAAAAA CCCAGGGAAT GGATTTTTCT
GCCGAAGATC GCATCGATAC CGCTCAATAT AATCGCATCC TTTGGGAAGG CATCATGCAC
ACGCCGCAAC CCGATTGA
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| Protein sequence | MHRTFLFLLS GAFALLAGPA AAQSAMDEKD GPPSSAGHRE SARAEAAVLP TGQRISPRAT
PGSRFWDRLM TDGGAAPVYA RGAVSTLLTP DGHYLLILTS GFKRNADAHG HPSAQRSRQS
VIIEDVSNPR QPQTIQVLPI NNSFCGMALS ADGKTLYVGG GVDDNVLIFQ KTGPSGQWRT
DGHPIPLGHQ SGLGLHVKPL TAGLALSPDG RRLLVSNFYN DSVSMIDLDQ RRVLRDVDLR
PGPSEGRHGQ AGGESPFWVV MDHRQRVYVS SMRDREIVVI DTGNDDPKIV ARIATPGNPN
RLLLDEARQR LYVAMENRDS IAVVDTQKLR LQGQAGLVPG EVRRAGTPGV SPGEENLGWS
ANALGISPDH QRLYATLGQM NAIAVLSLAG AMPHSLGLLP TAWSPQDLVP APAGDALWVI
NNKSIPGANP GYCSGYRHGC IASSPVQPKP NQYILQLSLS GLQEIPHLAK VDLPSMTSVV
LKNNHSTLLS HIDRQVMDFL HRHIRHVIYI VKENRSYDQV LGDLPRGNGD PSLTEFPLAV
TPNQHRLALD FVLLDHFLDT GEVSGDGWAW STAARESDIN SKMLPNNYAQ GGGSYDWEGT
NRNVNVGLQG EERRAANPDT PKDPDLLPGT ADVAAPDSAA GRYQQGYLWS AALRHGLTLR
NYGFFVDLER YGASTNRIPL SRHPYQEKII QAYPANPGLA AHTDPFFRSF DNAYPDYYRY
REWEREFRAY ERNGKLPTLS LIRFMNDHTG KFGQAMDGVN TPELQVADND FAVGLLAERI
AHSRYARDTL IFVVEDDAQD GPDHVDAHRS IAFVVGPYVK QGAVLSTPYN TLNLLRTMEM
VLGLPPLSAL DGAARPMADI FDLRQRPWSF QACPSGMLQS TALASRWPAR YRSCGSAQNH
LRPLHDGKYW AAKTQGMDFS AEDRIDTAQY NRILWEGIMH TPQPD
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