| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1941 |
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| Symbol | |
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| ID | 6877926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1932469 |
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| End bp | 1934676 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642789809 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002220367 |
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| Protein GI | 198284046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.299321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA TGCATTCCAC TGCCTTGCGC AACGCGGTAG CCTTTGCCGT TTTTACCCTC
GGTAGCGGCG CCGCCTTTGC CGCCGATGAA TCCCTCGGTA CCGTCACCGG TACGGCCGGT
GCCGCCAACA ACTTTTTCGG CAGCGCACCG GCCGGCAATG TCGGGCAGAC GCCAAGCGAA
GATCTGAAAA AGATCCAGCG CTTCAAAAAG GGTGCCACCA ATGCTGAAAC TCTCATCACC
AAGGGGCAAT TCGACCTCAT CACCCCCACC GACTCTTACA CCCAGGCCCT GCGCAACATG
CCCAACACCC TCGTCGTCAG CGGCGGCGAC AGCATGGATG GAGACGATAT TTATATCAAC
GGCTTTGGAA AGAACCTGAT CAACTTTACC CTGGATGGCA TCCCCCTCAA CGACAACGAC
AGCTACACCT TCTACAGCAA CGAATTCATC CCCAGCCGCC TGATATCCGG CACCAGATAC
TATCCTGGCG CCGAATCCGC CGCCATTCCC GGCCTGTCTT CCTTCGGCGG CTCCGTGGAA
ACCTACAGCC TCCAGCCCTC TCCCTACCCC TTTGTCCGTC CCCTGGCCGG GGTCGGGTCC
TTTGGCAAAT ACAATGCCGG CGGCCTCATC AATACCGGTC TGTTCCTGAG AAACATTGCC
CCCACCTCCG CCTGGGTCTA TTTCAACAAG AACCAGCGGG ATGGCTATTT CCAGAACAAT
CCAGCGGTGC AAAACCAGTT CCTCTTCAAG TCGGTTTCGC AGATCGGGCC CGGCCAGCTC
ACCTTGTTCT TCAGCCAGAA CAACCAGCGC TTCAATTACT ACAACGGCGC CACGGCTGCG
CAGATCGCCC AGTATGGTCG TGACTACAAC AGCAATACCG ACCAACCCTT CCTCGCCAAT
GGCAAACCCA ACACCGCCTA CACCGGCTAC AATTACAATC AATACCTCAA TTGGCTGAGC
TATGCCAAAT ATAAGGCGCA ATTCTCCTCG GTCAAATTCT CCAATCAATT CTACTACTAC
TATGGCAATG GTTTTAGCGC CGGCGCCAGC ACCTTCAGCC AAACCGTACT GGCGCCCAAT
GGCAGCATTA TCCACGCCGC CCCGCCGAGC AATGGCGTAT TGCAACGTCA TAGCGTCAAC
CAGACCGATC GCTGGGGCAA TATCCTGCGC ATGCGCTTTC CCCTCGGGCC GGTGGCCACC
GAGCTGGGTT TCTGGTTCAA CCACAACGAT ACCACCCACG ACAGCCAGTA TTACAACGGC
AACACCTATG TCGGCTCCAG CTACCTCGAA CCGGTGGTTA CCGACACCTA TGAACCTTAC
GTCGCCCTCA CCTATCAACC CATGGATAGC CTCAAATTCA GCGCCGGCGT CAAATATCTC
TATGCGACCC GCGATTTCCG CGACGATACC GCCCTGGCCC AGGGCAAACC GGGGCAGTTC
AATGCCACCT TCCGTTCCCT GCTACCTTCC CTCGGCGTCA ACTATCGCAT CCTGGACAAT
TGGCACATCT ATGCCAACTT CACCCAAAAC AGCAACCCTC CCGGATATAA CCAATTCTAC
ACCGGCACCT ACAATGCCAG TCTGAATCCC CAGAAGGCCA ACACCTACGA TATCGGCACC
GTCTGGGATA CGGGCGTGTG GTCGGGCGCG CTGGACCTCT TCCGCGTGGA TTTCCAGAAC
TACATCCTCT CCACCACTGT CGTCCTTCCC GGTAGCGCCA TCAACCAGAC GGTCCTCGCC
AACGCCGGCA CCGCCATCAA CCAGGGCATC AGTTGGCAGA ACAATTTTGT CATCAATGAC
ATTTTCAGCG CCTACGCCAA CTTCGGTTTC CTCGACGCCC GGCTCAAATC GGCCGGCAAG
CCCTTTCCCT ATGCGCCCCA TCATACCGAG GCGGCGGGTC TGATCGTGCG TTACCGTGGC
TTCCGCGGCA GCATCGGCGT CAACGAAATT GGCAACGCCT ATTATGCCTT GGGCGGCGGC
TTTCTGCCCT TGGGCAGCCG CTTCTACACC GATGCCAGCC TGCGCTATAC CTTCCGCAAT
GCACCTCTGG GCCGGAGCCT GGGCTTCAAG AGCGTGAGCG CCGGACTGTA TCTCAATAAT
CTCTTCGATC GCAGCTATAT CCAGAGCTAT ACCGGCAGTT CGGGCAACCC CAACAGGAAG
CTCAACCTGC CCACCAACGT CTATGCCTCC CTGGAGGCCA CCTTCTAA
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| Protein sequence | MTKMHSTALR NAVAFAVFTL GSGAAFAADE SLGTVTGTAG AANNFFGSAP AGNVGQTPSE
DLKKIQRFKK GATNAETLIT KGQFDLITPT DSYTQALRNM PNTLVVSGGD SMDGDDIYIN
GFGKNLINFT LDGIPLNDND SYTFYSNEFI PSRLISGTRY YPGAESAAIP GLSSFGGSVE
TYSLQPSPYP FVRPLAGVGS FGKYNAGGLI NTGLFLRNIA PTSAWVYFNK NQRDGYFQNN
PAVQNQFLFK SVSQIGPGQL TLFFSQNNQR FNYYNGATAA QIAQYGRDYN SNTDQPFLAN
GKPNTAYTGY NYNQYLNWLS YAKYKAQFSS VKFSNQFYYY YGNGFSAGAS TFSQTVLAPN
GSIIHAAPPS NGVLQRHSVN QTDRWGNILR MRFPLGPVAT ELGFWFNHND TTHDSQYYNG
NTYVGSSYLE PVVTDTYEPY VALTYQPMDS LKFSAGVKYL YATRDFRDDT ALAQGKPGQF
NATFRSLLPS LGVNYRILDN WHIYANFTQN SNPPGYNQFY TGTYNASLNP QKANTYDIGT
VWDTGVWSGA LDLFRVDFQN YILSTTVVLP GSAINQTVLA NAGTAINQGI SWQNNFVIND
IFSAYANFGF LDARLKSAGK PFPYAPHHTE AAGLIVRYRG FRGSIGVNEI GNAYYALGGG
FLPLGSRFYT DASLRYTFRN APLGRSLGFK SVSAGLYLNN LFDRSYIQSY TGSSGNPNRK
LNLPTNVYAS LEATF
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