| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1934 |
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| Symbol | |
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| ID | 6877919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1923153 |
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| End bp | 1923905 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642789804 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002220362 |
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| Protein GI | 198284041 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.127514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATA TCACCAAAGT ACCTTACGCA CCCGGCATCA CTGTCTGGAA GCAGATCGTC
GATGACATCC AGCAGCGGAT GGACAGAGGC GAGGTGCGGC CCGGCGAGAA ACTACCCAGC
GAAGGGGCTC TGGCATCGAC CTACGGCGTT AACCGGCATA CGATTCGGCG GGCACTGCAG
GAACTCGCCG CTCTTGGAAG ACTGCATATT GCCCATGGCC GCGGTTCTTT TGTAGCGTCT
ACCGTCTTTG ATTACCAGCT GGAAGAACGC CCGAGATTCT CTGAATGGAT CAAGAAGTAC
AACCGGCCAG GTTCTTCGGA GGTGTTGGAA GCAGCCATCA TACCCCTGCA GGATCTACCC
GAATTACCGC GTATCCTCAA CTACGGAGTG TTTCCCGATT ATCCAAACGT GGCAATGGTT
GAAACGCTGG GCAAACTTGG TGAGCATCCC GTATCCATCG CGCGGCACCT GTTTTTTGGT
GAACGCCTGT TGACCTTGGT GGATGATCTG AAACAGGGGC TGGGGATCAC GGTATCGCTG
AAAAAAATGG GCGTGAATGA TTACACCCGA CTGAGGTCCT CCGTCTCAGC CGAGTTGCCC
AAAGCCAGGG AACGTCGGTT ACTCGCCATA GATAAATTCG ATCCCGTTTT TATCTGCGAG
AACGTGAACA TCGACCCGGA AGGTGTGGGA ATAGAGTTCT CAACGGTGAT CTATCCTGCT
TCCCGGGTGC GACTGGTGTA CGAACCGGAG TGA
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| Protein sequence | MTDITKVPYA PGITVWKQIV DDIQQRMDRG EVRPGEKLPS EGALASTYGV NRHTIRRALQ
ELAALGRLHI AHGRGSFVAS TVFDYQLEER PRFSEWIKKY NRPGSSEVLE AAIIPLQDLP
ELPRILNYGV FPDYPNVAMV ETLGKLGEHP VSIARHLFFG ERLLTLVDDL KQGLGITVSL
KKMGVNDYTR LRSSVSAELP KARERRLLAI DKFDPVFICE NVNIDPEGVG IEFSTVIYPA
SRVRLVYEPE
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