Gene Lferr_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1920 
Symbol 
ID6877905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1909798 
End bp1910490 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID642789790 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002220348 
Protein GI198284027 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG CTTACCTCAT CCACCTCGCC AATTACTCTG ACGGCGTGCT CTATATACTG 
GCCGGCCTTC TTGTGGTCGC CCTTGGCGTC ATTGTCGACC GGTTCTGGTA TCTGCGCCGC
ACCATCCTGC GCGGCTCGCT ATTCGTTCGA GAGATCGCCC AGCACGGTCG CCTGGATCGG
GAAACCCTGC AGAGACTTGC GGATGAGGCC GGAGATTTGC CCGAGGCCGC CCTGCTGAAG
ACGGCGGTGA TCCATTCGGG ATATGTGCTG GGCGATCCTC TCGCCAGTCG CCTGGAGGAG
AGCATCCTGA TCATGGCGCC GCAACTGGAT CGCCGTCTGT GGCTGTTGGA CACCATCATC
ACCCTGGCGC CGCTGCTGGG CCTCTTCGGT ACTATCATCG GCATGTTTCA CGCTTTCTCC
GTATTGACCG CACCAGGGCA CGCACCTACC GCGGTGACGG GCGGGGTGGC GGATGCCCTG
GTCGCCACCG CCACCGGCCT GTTCGTCGCC ATGACCGGCC TGGTGGCTTT CAATGCCTTC
AATAATCAGG TGCGGCAGAT CCTGCTGCAA CTGGATTCGG TGAAGACCAT ATTGCTCAAC
AGCATGGACG GTCACCCGAT GCCCGATAAC AGGGAGAATA TTTTGCAGGC GGTCGCCCCG
AAGGTGGCGT CAGCCGTGGC GAGGGCGGTC TGA
 
Protein sequence
MNTAYLIHLA NYSDGVLYIL AGLLVVALGV IVDRFWYLRR TILRGSLFVR EIAQHGRLDR 
ETLQRLADEA GDLPEAALLK TAVIHSGYVL GDPLASRLEE SILIMAPQLD RRLWLLDTII
TLAPLLGLFG TIIGMFHAFS VLTAPGHAPT AVTGGVADAL VATATGLFVA MTGLVAFNAF
NNQVRQILLQ LDSVKTILLN SMDGHPMPDN RENILQAVAP KVASAVARAV