Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1920 |
Symbol | |
ID | 6877905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1909798 |
End bp | 1910490 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789790 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_002220348 |
Protein GI | 198284027 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG CTTACCTCAT CCACCTCGCC AATTACTCTG ACGGCGTGCT CTATATACTG GCCGGCCTTC TTGTGGTCGC CCTTGGCGTC ATTGTCGACC GGTTCTGGTA TCTGCGCCGC ACCATCCTGC GCGGCTCGCT ATTCGTTCGA GAGATCGCCC AGCACGGTCG CCTGGATCGG GAAACCCTGC AGAGACTTGC GGATGAGGCC GGAGATTTGC CCGAGGCCGC CCTGCTGAAG ACGGCGGTGA TCCATTCGGG ATATGTGCTG GGCGATCCTC TCGCCAGTCG CCTGGAGGAG AGCATCCTGA TCATGGCGCC GCAACTGGAT CGCCGTCTGT GGCTGTTGGA CACCATCATC ACCCTGGCGC CGCTGCTGGG CCTCTTCGGT ACTATCATCG GCATGTTTCA CGCTTTCTCC GTATTGACCG CACCAGGGCA CGCACCTACC GCGGTGACGG GCGGGGTGGC GGATGCCCTG GTCGCCACCG CCACCGGCCT GTTCGTCGCC ATGACCGGCC TGGTGGCTTT CAATGCCTTC AATAATCAGG TGCGGCAGAT CCTGCTGCAA CTGGATTCGG TGAAGACCAT ATTGCTCAAC AGCATGGACG GTCACCCGAT GCCCGATAAC AGGGAGAATA TTTTGCAGGC GGTCGCCCCG AAGGTGGCGT CAGCCGTGGC GAGGGCGGTC TGA
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Protein sequence | MNTAYLIHLA NYSDGVLYIL AGLLVVALGV IVDRFWYLRR TILRGSLFVR EIAQHGRLDR ETLQRLADEA GDLPEAALLK TAVIHSGYVL GDPLASRLEE SILIMAPQLD RRLWLLDTII TLAPLLGLFG TIIGMFHAFS VLTAPGHAPT AVTGGVADAL VATATGLFVA MTGLVAFNAF NNQVRQILLQ LDSVKTILLN SMDGHPMPDN RENILQAVAP KVASAVARAV
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