Gene Lferr_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1916 
Symbol 
ID6877901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1906723 
End bp1907124 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content54% 
IMG OID642789786 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002220344 
Protein GI198284023 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCC GTTACTTCGA GCAGAAGAAG GGCCGGGTGG AGATCATTCC CATGATCGAC 
ATCATGCTCT TCCTGCTGGT GTTTTTTATC ATGATCACGC TGCAAATGAT CCCCGACAAA
GGACTGAGCC TGCAGTTGCC CAGGTCCAGC CAGGCGCAGC AGCTTCCGCG CCCGCACTAT
ACCATCAATA TCGATAAGGA TGGGTCGGTG GATGTGAAGG GTCATCACTA TGATCTGGAC
GACCTGCAGA AAATGCTCGC CGGTGATGGT AACCCTGCCA AGACCCAGAT CACCATCGCT
GCCGATAAAG GCGTGCCTTT TCAGGATTTC GTTCATGTGA TGGATCGCTG CCAGAAGGCA
GGAGTGAGCG ATATCGGGAT TGCCGCGAAA GCGAGTGGTT AG
 
Protein sequence
MERRYFEQKK GRVEIIPMID IMLFLLVFFI MITLQMIPDK GLSLQLPRSS QAQQLPRPHY 
TINIDKDGSV DVKGHHYDLD DLQKMLAGDG NPAKTQITIA ADKGVPFQDF VHVMDRCQKA
GVSDIGIAAK ASG