Gene Lferr_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1908 
Symbol 
ID6877893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1899358 
End bp1900620 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content64% 
IMG OID642789778 
Productphosphoribosylamine/glycine ligase 
Protein accessionYP_002220336 
Protein GI198284015 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA AAGTCATGGT CCTCGGCAGT GGCGGACGCG AACATGCCAT CGCCTGGAAG 
CTGGCCCAGT CGGCGGAGGT AGCGAAAGTC TACTGTATGC CCGGCAATCC CGGTACGGCG
GCCGAGGCCA AAGTCCACAA TCTGGCCCTG AAGCCGACGG ATGCCGACCA GGTGGTCGCT
GCCGCCCGTG CGTTGAACGT CACGCTGGTG GTCATCGGCC CCGAAGCCCC ACTGGTGGCG
GGTGTAGGTG ATGCGCTGCG CCGGGCTGGC ATTCCCGTCT TTGGTCCCAA CGCCGCCGGG
GCGATGCTAG AGGGTAGCAA GGCCCACGCT AAATCCTTCA TGGTGCGGCA CGGTATCCCT
ACCGCCCGTT ACGGACGTTT TGACGATACC GACGCGGCCC TTGGCTACCT GCGTGACCAG
CCGTTGCCGG TAGTGGTCAA AGCCGACGGC CTCGCCGCCG GCAAAGGAGT CGTCGTGGCT
GTGGAGCGGG CCGAAGCGGA AGCAGCGGTG CACCAGTTCC TGAAATGGGG TCCTATCGTC
ATCGAAGAAT TTCTGGAGGG GGAGGAAGCC AGCTTCATCG CCATCGTGGT GGATGGTCAG
GTGTTGCCGC TGGCGGGGTC GCAAGACCAC AAGCGTCTGC TGGACGGCGA TCAGGGTCCC
AATACTGGCG GCATGGGTGC CTATTCCCCC ACCCCCATCC TTGATACCGC CATGAGCGAG
CGGGTGTTGC GCGAAGTGAT GCGCCCGGCA GCGCAAGGAT TGATGACAGA TCGCACGCCC
TACTGCGGGT TTCTCTATGC CGGTCTGATG ATCGGCCCCA CCGGACCCAA GGTGCTGGAA
TTCAACTGCC GACTGGGCGA TCCCGAGACA CAGCCGCTGA TGATGCGCTT GCGGTCCGAC
CTCTATACGC TTCTGCTGAC CGCGGCCCGC GGCGATCTGC TACCGACGGC TCTCGACTGG
GACAGTCGCG CTGCCCTCTG CGTCGTATTG GCGGCTGACG GTTATCCCGA TCATCCACAG
ACGGGTGACC CCATCTGCGG TCTCGACGAG ACGCAGGGGG ATACTGTCAA AATCTTTCAT
GCCGGAACTC AGGCGCGTGA CGGCACCGTC ATCACCGCGG GTGGGCGGGT GCTGGGCGTC
ACGGCGTTGG GAGAAAATCT GGCGATCGCG CAACAACGTG CCTATGCGGC CGTCGCCGAT
ATCCGCTGGC GGGGCTTGCA GTACCGGCAC GACATCGGCC ACCGCGGCCT GCGGCGTGCC
TGA
 
Protein sequence
MGAKVMVLGS GGREHAIAWK LAQSAEVAKV YCMPGNPGTA AEAKVHNLAL KPTDADQVVA 
AARALNVTLV VIGPEAPLVA GVGDALRRAG IPVFGPNAAG AMLEGSKAHA KSFMVRHGIP
TARYGRFDDT DAALGYLRDQ PLPVVVKADG LAAGKGVVVA VERAEAEAAV HQFLKWGPIV
IEEFLEGEEA SFIAIVVDGQ VLPLAGSQDH KRLLDGDQGP NTGGMGAYSP TPILDTAMSE
RVLREVMRPA AQGLMTDRTP YCGFLYAGLM IGPTGPKVLE FNCRLGDPET QPLMMRLRSD
LYTLLLTAAR GDLLPTALDW DSRAALCVVL AADGYPDHPQ TGDPICGLDE TQGDTVKIFH
AGTQARDGTV ITAGGRVLGV TALGENLAIA QQRAYAAVAD IRWRGLQYRH DIGHRGLRRA