| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1900 |
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| Symbol | |
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| ID | 6877885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1886164 |
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| End bp | 1891650 |
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| Gene Length | 5487 bp |
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| Protein Length | 1828 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789770 |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_002220328 |
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| Protein GI | 198284007 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC GTAAAAGCAG TCGCCGGATT GTACTGACAG CAGCAGCATT GTTGATTGCG
GCCATGGGCT TTGCCGCCTG GGCCTTCACC GGCAAGGGTT CATCAGGCTC TCAGCCCGCC
GCGCCGGTTG CCGGCGCCAC GTCCGCACTG GCAACCCGGA GCGCGGCGAT GCCCCAATCC
CCGACCCAAC GCAGTGACAA CACCCCAGCC ACCCCTGAGG CATTGCCTAC GGCACTGACG
AACTCCGCGA GCAATGGTGC TACGCTTCCC TTGGTCAACC TGTCCCGCGC CCTGCCCGGT
TTGGGGAACG ATGCGCAGAC TTATGCCAGT GATCTGGAGT CCTCCAAGCT GGGGCACAGC
TTCCGTGCGG CAGGCCGGGC CAATGACCAG GCGATTCGCG CGGCCCTGAA AGCTGGCGAC
ACGGCCAAGG CCGCACGCCT CCAAACCCAG CACGAAGCCT GGAAAAAGCA GCAACGTACC
CATGCCCTGG ACACAGCGGA AAAGGCTTAC GCCGCGGGCG ACTGGTCATC GGCCGTCGCC
GCCTACCAAC AACGTATCGC CCTTGGCAAC AACGGCAATC CGCAGATCTG GTGGCACTTG
GCCAACGCCA TCCGCAAGAA TGGCGCGCCC TTCGAGAAAG ATATCGCTTA CGCCGCCTAC
CTCGCTTATG AGCGCGCCAT TCAGCAGCGC AAACCCGATG TCGCCATACT GCTTCCCGCC
CTGAATCTCT TGCGGCAAAC TCTGGCGGCG CGCGGTAATC ACCTGGGCGA AATTCATTTG
CTGGAAGCCA TGTACCGCAC TTATCCCGCG GATGCGCGGA TTGCCGCCGA TTTGAAAAAA
ACGGTCATGA CCTATGGCTT CCAGGTGCAA AGTGTGACCC CGGATGCCAA CCAGTTCCCA
ACCCGCACCT GCGTGAAGTT TACCGCCCCG CTCTCCGAGG CACCGGATTT TCATGCCAGT
AACTGGGTAA CCTTTTCCCC CGTCCGGCCC CATGCGGCGG TGGTCCGTGA GAACGGCGGC
ATCTGCGTCA CCGGTCTGCC TGCGGGCAGC AGCACGCAGA CGCATATCCG GGCAGGCCTG
CCCGCCATTG CCGGAGCGGT CATGACGGCG GCGAAAAGCA TTACGTTGAC CCTGCCCAAT
CGCTCACCAA GCATCATCTC CGATACCGGC CGCTTTATCA TTCCGGCATC ACTGCCACCG
GCGGTAGGTT TTTCCAGCGT CAATATTTCA CGGGTCAAAC TGCAGATCAA TCGGGTGCCG
GAACGCGCCC TGCTGGCTTT CGTCGCCAAT CACCCGTTGC TGAATCAGGA CAGCGACGAA
TCCACCCTGA ACAACCAGAA CAGCCTGACG GTCTGGCGCG GAACGGCAGA CATCCCGCAT
TTCACGCAGA ACCAGTTGAT GCACACGATA TTGCCCCTGC CCAAAATCCT TCAGAAGCCG
GGGCTCTACG CGATCCAGAT CGGCCCCGGA GACGGCACGC CCAATGCCAA CGGCAGCCTC
AACACCGTGC AACTGGTGTT GCGCACCAAC CTGGCACCGA CAGTCTGGCA GGGGCGTAAT
GGCTTGTATG TGCAGATGCG CCGTTATACC GACGCCAGCC CCTGGAGCGG CGTCAAAGTC
GAACTCATCG CCCAGGACAA CGATATCCTG CAAACGGTGC GGACCAACAG CGACGGCATC
GCCGTCTTTC CGAAACCCAT CCTGCAGGGC AGCGGCGGAC AGAGTCCAGC GGCGCTGCAT
ATTTATGGTC CCGGTAACGA GTTCACCCTC TTTAACCTGC AGGGATCGCC GCTGAATCTG
TCCGGACGCG GCATCTCCGG GCGAACGGCC CTGAAACCGG TCAGCCCTTT CCTGTGGCTG
GACCGCGGTA TTTATCGTCC CGGCGAGACG GTGCATGTGG CGGCCCTTTA TCGCAGTGCT
GCCGGCAGAC CGCTGGACTT GCCTTTGCAC CTCATCGTCC GCCGGCCCGG CGGGCAGGTT
TTCCTGGACA CTGTCCCCAA ACTGTCTGAC GACGACGCCA TCGCCGTGCC CGTCAAACTG
CCCTTGGCGG CGCAGGATGG TAACTGGAGC GTGAGCCTGG CCACCGGCGT ACGTGAGTCC
GCTCTGGCGA AGGAGACCTT TACGGTATCC GCCTTTGTAC CGCCGACCCT GGCCGTCGAG
CTAGGCAACG CCAAGGCCAT TCCGGCGGGC CAACAGGTGC AGTGGCCGGT ACATGTGCGT
TATCTCTATG GTGCCCCCGG CGCCCATCTG TCGGGCACAG CGCGGATCAG CCTGAGCAAC
GGCTCTACCC CTTATCCGCA ATGGCAGCAC TACCATTTCG GCCTGCATGG CGAGGTGTTT
ACGGCACCGG TGCAAGAGCC CACGTTGCCG GAAACCGACG CCACGGGCCT CACTCAAGTA
CCCATTGACC TGAAGAAAAT ACCGGACAGC ACCCGTTTTC TGGAGGCGCA TGTGGCGGTC
TCCATCAACG AGCCCTCCGG CCGCCCGGTG AACAGTCGCA TCATTCTGCC CGTCACGCCG
GATCATCCCC TCATCGGCAT CGAAAACGGC TTCCGGGATG AAACCGTAAC CGCGGGGAAA
TTACCGGTTT TTCACATCGC GGCGGTAGCC CCCGATGGCA AGGCCAAGGT CATGCCGGTG
CAGATCCAGG TGGTCCGGCA GTCTTCCGAG TGGAATATCT CCCTACATAA TGGAGTGGCC
AGTTGGGGCT ATACCTATAT CAACCATCCG GTGCTGACCA AGGATGTAAC CTTGCCAGCC
GGTCAACCAT ATGCCCTGCA ATTACCCGTG CTGGATTATG GCCGTTACCG CCTGCGAGTG
ATTGAAGCCC ACGGCGGCCT GGCCGCCAGT TCGGTGATTT TTTACTCCGG CTGGCAGACC
AGCGGCAATC CGGGGGCGCC CCAGCGGGTT TCCGTGCGCA GCGGTGCGGC GGAATATGCC
GCGGGCAGCA CGGCCGATAT CCATGTCTCC GCGCCCTTCT CCGGCCCGGC GGTACTGGTC
ATCGCCAATG ACAAGATTTT AAAGGTGAAG AACTTTACCC TGCCCAAAGG GGGCCGCACC
CTGCATGTGC AGGTCCGGAA GGGCTGGGGC GCGGGCGCCT ATGCGCTGGT GGATGTGTTC
CGCCCTGCCA GTGCTACCGA GGCCCCGGAA CGAGCCATCG GTCTGACTTG GCTCGGCCTC
CAGCCGGGCC GCCGTGCCAT TCCGGTCCGC TTTGCCGTCG ATCCGGTATA CCGCCCACGG
CAGACCATCC GGATTCCGGT GAAAACCCGC CCCGGCGCCT ATGTGACGCT GGCGGCGGTC
GATAAAGGCA TCCTCAACCT CACCCAGTTC CCCAATCCCA ACCCCCTGCG CCACTTCTTT
GGCAAGCGGC GGCTGGATAT CAGCGTCTTT GACGACTACG GCGCCCTGCT GGCCCGCCCC
ACGGGTTTTG AAGCCCTGCT GCAAAACGGC GCAGGGGCCA ATTTCGGCCC GGCGGCGCGA
CCCATTCCGC AGAAGGTGGT GGCGCTCTTC GCCGGCCCGG TGCAGGCCAA CCGTGATGGC
ATCGCCGAAC TGCCCCTCAC GATGCCGGAG TTCAACGGCG AACTCCACCT CATGGCCGTG
ACCTGGAAGG GCGACGCGGT CGGTGCCGGC GACACCAACA TCATCATTCG TAACCGCCTC
ATCGCCAACC TGCTGCTGCC GCGCTTCCTG TCTCCCGGCG ACAGCGTCCA GGCTACGGTC
ATGTTGCAGA ACCTGAAGCT GCCAGCGGGC ATATATCACA GTCAGGTCAC GGCGACCGGG
CCAATCCGCG TCGGGAGCAA TGGCAGTAGT GCGGCATCCC TGAAACCGCA AGCCATGCGT
CTGCTGCCGG TGACCCTGGC AGGCACCGGA GAGGGCATGG CGCACCTGAC CCTGACCGTC
ACGGGTCCGG ATGGTTACCG CCTGGTTCGC CACTGGAATA TGGTGGTGCA CTCCACGCAG
CCGCCCGTTT CCAAAAACCA TAATCTGACG CTGGCGGCGG GCGACCACCA GGCACTACAG
CCGGATACCC AGGGCTTTAT CCCCGGTTCC ACCGTGAGCT CGGTGACACT CGGCAATACC
ATGCCCTTCA ACCCCAAGGC CTATGTACAG GCCCTTTACC AAGGTTGGCA CGGTGGTTCC
CTGCTGAATG CCGCCAGCAA AGGTTTCCCG CTGACGGTGT TGAAGCCGCC GCTGATTACG
CCCCGGCGTG CCGCCAAACT CCAGGATTAC GTCAATCAGG TGCTGAATGA TCAGCGCTAT
GACGGGGCCT TCGGCCTGTG GTCCAATAAT GGTGACGCCC AACCCTGGCT TACGGCCTTT
GCCACCGAAT TCCTCCTCCG CGCACAAAAG GCCGGGGCCA CGGTGCCGCA ACCGACCATC
GATCAAGCCT TGCACTGGTT GGGTCAGGAA GTCGAAAACG AAAATCACAC CGTCTTTGAC
CGCATCTACG CCGTTTATGA CCTGAGCCTG GCGGGCAAAC CTCCGGCGGG GGCCATCCGT
ATGCTGGCAC GGCACATGAA CCAGATCAGC ATGCCCTTGG CGCTGGCACA ACTGGGTTCG
GCCCTCAACA CCATCGGCGA ACCGCACCAG GCGCTAAAAG CCCTGCGGAA GGCCATCAAA
ACGCAAGAGC CGGTCGGCGG CGACTGGTGG TGGGGGCGTT CCGACTGGGA TGCGGCCTTT
GGCTCGCCGC TGCGCGACGC CTGGGCCGTG CCCGCCATCA TCGCGCAGAC CGGTTTGATG
CCCGATGCCG TGACCAAGTT GCGGCAGGAC CTCCCCGGCG CAGGATTGGA ACCCGACGAC
CTGACCACCC AGGAACTGGC TTGGGCGCTC TACGCCGATG GCGTGCTGGG CGGCGCGGGT
CAGACCGTCC ATGGCCAATG GGGCAACCAG GTCATTCAGC GGTCAGGGCC CGTGGTCCTG
CCCCTGACCG GACCCGTAAC GCTACGCAAT CTAGGTGACG AAATCCTCCC CGTTTCGCTG
GCGACCACAG GCATTACGCT GACGCCGCCG CCCGCCGCCG CCCACGGAAT GGAGGTCAGC
CGGGCTTTTT ATACGCTGGC TGGTAAGCCG TTGAAGCCGG AATCCCTTCC ACAAAACACC
GTCTTCGTAG TCGTGTTGAA AGGGGCGATC ACCGACAACC TGCCCCATCG CGCACTGCTC
GATATGGGTT TGCCGCCGGG CTGGGAACTG GCCGGCAGCG TAACGCCGGG CAAGGTCCAT
GGCCTGTCCT GGCTGCATCA TCTGACGGCG CCGGAAGCCA CGGCCGCCAC CGATGATCGC
TACGAAGCGG CCTTTCGGAT GGCCCCCAAA AACAATGACG CGTTCAACGG CAATGGGGTT
CCAGACTTCA AGACGGCCAT CCTGCTGCGC GCCGTCACCC CCGGTCAGTA CGTCCTGCCG
GGGGTCACCG TCAGCGACCT CTTTCACCCG TCCATATTCG CGCGCACGAC CGGGCGGAAG
GTGGCCGTGA CACCGCCGGC CTCCTGA
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| Protein sequence | MPQRKSSRRI VLTAAALLIA AMGFAAWAFT GKGSSGSQPA APVAGATSAL ATRSAAMPQS
PTQRSDNTPA TPEALPTALT NSASNGATLP LVNLSRALPG LGNDAQTYAS DLESSKLGHS
FRAAGRANDQ AIRAALKAGD TAKAARLQTQ HEAWKKQQRT HALDTAEKAY AAGDWSSAVA
AYQQRIALGN NGNPQIWWHL ANAIRKNGAP FEKDIAYAAY LAYERAIQQR KPDVAILLPA
LNLLRQTLAA RGNHLGEIHL LEAMYRTYPA DARIAADLKK TVMTYGFQVQ SVTPDANQFP
TRTCVKFTAP LSEAPDFHAS NWVTFSPVRP HAAVVRENGG ICVTGLPAGS STQTHIRAGL
PAIAGAVMTA AKSITLTLPN RSPSIISDTG RFIIPASLPP AVGFSSVNIS RVKLQINRVP
ERALLAFVAN HPLLNQDSDE STLNNQNSLT VWRGTADIPH FTQNQLMHTI LPLPKILQKP
GLYAIQIGPG DGTPNANGSL NTVQLVLRTN LAPTVWQGRN GLYVQMRRYT DASPWSGVKV
ELIAQDNDIL QTVRTNSDGI AVFPKPILQG SGGQSPAALH IYGPGNEFTL FNLQGSPLNL
SGRGISGRTA LKPVSPFLWL DRGIYRPGET VHVAALYRSA AGRPLDLPLH LIVRRPGGQV
FLDTVPKLSD DDAIAVPVKL PLAAQDGNWS VSLATGVRES ALAKETFTVS AFVPPTLAVE
LGNAKAIPAG QQVQWPVHVR YLYGAPGAHL SGTARISLSN GSTPYPQWQH YHFGLHGEVF
TAPVQEPTLP ETDATGLTQV PIDLKKIPDS TRFLEAHVAV SINEPSGRPV NSRIILPVTP
DHPLIGIENG FRDETVTAGK LPVFHIAAVA PDGKAKVMPV QIQVVRQSSE WNISLHNGVA
SWGYTYINHP VLTKDVTLPA GQPYALQLPV LDYGRYRLRV IEAHGGLAAS SVIFYSGWQT
SGNPGAPQRV SVRSGAAEYA AGSTADIHVS APFSGPAVLV IANDKILKVK NFTLPKGGRT
LHVQVRKGWG AGAYALVDVF RPASATEAPE RAIGLTWLGL QPGRRAIPVR FAVDPVYRPR
QTIRIPVKTR PGAYVTLAAV DKGILNLTQF PNPNPLRHFF GKRRLDISVF DDYGALLARP
TGFEALLQNG AGANFGPAAR PIPQKVVALF AGPVQANRDG IAELPLTMPE FNGELHLMAV
TWKGDAVGAG DTNIIIRNRL IANLLLPRFL SPGDSVQATV MLQNLKLPAG IYHSQVTATG
PIRVGSNGSS AASLKPQAMR LLPVTLAGTG EGMAHLTLTV TGPDGYRLVR HWNMVVHSTQ
PPVSKNHNLT LAAGDHQALQ PDTQGFIPGS TVSSVTLGNT MPFNPKAYVQ ALYQGWHGGS
LLNAASKGFP LTVLKPPLIT PRRAAKLQDY VNQVLNDQRY DGAFGLWSNN GDAQPWLTAF
ATEFLLRAQK AGATVPQPTI DQALHWLGQE VENENHTVFD RIYAVYDLSL AGKPPAGAIR
MLARHMNQIS MPLALAQLGS ALNTIGEPHQ ALKALRKAIK TQEPVGGDWW WGRSDWDAAF
GSPLRDAWAV PAIIAQTGLM PDAVTKLRQD LPGAGLEPDD LTTQELAWAL YADGVLGGAG
QTVHGQWGNQ VIQRSGPVVL PLTGPVTLRN LGDEILPVSL ATTGITLTPP PAAAHGMEVS
RAFYTLAGKP LKPESLPQNT VFVVVLKGAI TDNLPHRALL DMGLPPGWEL AGSVTPGKVH
GLSWLHHLTA PEATAATDDR YEAAFRMAPK NNDAFNGNGV PDFKTAILLR AVTPGQYVLP
GVTVSDLFHP SIFARTTGRK VAVTPPAS
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