| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1898 |
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| Symbol | |
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| ID | 6877883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1883488 |
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| End bp | 1884609 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642789768 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002220326 |
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| Protein GI | 198284005 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.541333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT TATATAACCG GTGTCGCGCA TGTCGTCCAG TTTGCCTGGT AGCACTTGCT
TTAACCTGCC TGTCGGCATC GCCATCCATA GCCGAGGCGA ACAATCTGCG CTCGGCGGTT
TCCTGGAATC TGCACCTCAG TCTGGAGGGT ATCGACAATT TCTCCGGAGG AATCGCCCCG
GGCGCCGTGG GTAATGCTAC GGCTAGGGCG GGTTTTGCCT TCAATACCCG TCGCGCCGGT
TGGTGGACCG GCGGGCGATT CGTCGCACAG TTTCTGGCCA TTCAGAATGG CAATCCGGAG
CACTACGTGG GCGATACCCA AGGGGTTAAT GCCTTTACCG GGCTTAATCG GGGCGCGTTC
TATCAACTGT ACTACCGGCA AAATATAGAT AATGCCACGT TGAGGGCAGG ACTCATCAGT
GCCAATGATT ATTTCGATTC CACCGGTGTA GCGAGTAATT TCCTGAATGT TTCTTATGGG
TTTGGCTCCG CTATGGGAAT CAATGTTCCA GGAGCTTCTT CTTACCCATT TTCCAGCCTT
GGAGTGATGG GAAGCTATAG CGCTGACGGC TGGACGGGAA TGGCCGGCAT TTTCGAGGGA
GATGCCATTC ATCCTTTCAA GGATCCTACG CATCGTGGAA ACATGATCTG GCTGGAGGCC
GACAAGAGTG GTTCTCTGGG TGATGGAAAA TATACGGTGA AAGTGGGCGG GTGGCGTAAC
CGCCAGTTGC CACAGTATCA GGCAACGCTG GGTAATGACA CTAGTGGTAT GTATACCACG
GGAGAATATC GCTGGGAGAT GGACGGTATG GATTGGGGCA GTTTTTTGGA GTTCGAAGCT
GCGCCTAATC CGGTGAATCT TCTGCCTTGG TATATGGGTG CCGGGTTGCG CCTGAAACAC
TTCTGGGCGG TGCGCCCGGG GGATAGTGCG GGTATCGGCA TGGCCCGGGC ATGGTTGAGG
GGCGCTCCTT ATAATGCGGA GACAGACTTT GAGGGATATT ATTCTGCGCG GATAATCCGT
CGGTTATATC TACAAACAGA CATTCAGTAT GTCGTCCATC CCAGCGCAAT ATACCAGAAT
GCGCTGGTCG GTATCGTGCG CCTGCATGTC ACTTTTTCCT AG
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| Protein sequence | MNDLYNRCRA CRPVCLVALA LTCLSASPSI AEANNLRSAV SWNLHLSLEG IDNFSGGIAP
GAVGNATARA GFAFNTRRAG WWTGGRFVAQ FLAIQNGNPE HYVGDTQGVN AFTGLNRGAF
YQLYYRQNID NATLRAGLIS ANDYFDSTGV ASNFLNVSYG FGSAMGINVP GASSYPFSSL
GVMGSYSADG WTGMAGIFEG DAIHPFKDPT HRGNMIWLEA DKSGSLGDGK YTVKVGGWRN
RQLPQYQATL GNDTSGMYTT GEYRWEMDGM DWGSFLEFEA APNPVNLLPW YMGAGLRLKH
FWAVRPGDSA GIGMARAWLR GAPYNAETDF EGYYSARIIR RLYLQTDIQY VVHPSAIYQN
ALVGIVRLHV TFS
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