Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1890 |
Symbol | |
ID | 6877875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1877113 |
End bp | 1878327 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642789760 |
Product | hypothetical protein |
Protein accession | YP_002220318 |
Protein GI | 198283997 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.727101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.399436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAATC GCGTAGCAGT CAAAAAACAG TGTCCACGAA TCAGACATCG GCGCTCAATG ACGCGGATTT CCGCGTTATC TGCGTTGGGG TGTCTGTTGT GTTTCGTTAA TGAGGCGGCA CAAGCGACCC CCTTGGAAAT GCCCAGCCCC CTGACCTTCC AGGCCGGCCC TTTGGGCACG CTGAACGTGC AGGGCGTGGC CAGCGGCTAC GCCGTCTGGC AGGACAACAA GTTCGCAGGA TCAGGCAATC CCGGCAACAA ATCTGCGTCC GCCGACATCA GCAACGGTCA GGTGATCATC CAGAAGAACT CCGGTCTGGT GCAGTTCTAT CTGCAGGCAG GGGCCTATAA CGTCATGAGC CTCGGGTCCA ATTTTGTCTC CACCGGCACC TTCACCCAGA ACACCTTCGG TGCCCTGCCC GTCGGTTATC TCGAAATTGC CCCCACCGAT AACTTCAATG TCCAGATCGG CAAACTCCCG ACCCTGATCG GCGCGGAATA CACCTTCAGC TACCAGAACT GGAACATTGA GCGCGGCCTG CTCTGGGGCC AGGAGAATGC CGTCAACAAG GGCATCCAGG CCAATTACAC CATGGGGCCG GTCACCGCCT CGGTATCCTG GAATGACGGC TTCTATTCCA ACCGATTCAA CTGGGTGACT GGCGCCCTGA CCTGGGCCAT CAACAAAGAA AACAGCGTTT TCTTCCAGGC CGGCGGCAAT ATGGGGCATA CGAATTTTGC CTATTCCTCC ATTGCCACCA CACCTCTGCA AAACAATGAG AGTATCTACG ACTTGGGCTA TACCTATACC GGTGAAAACC TCCTCGTGAC GCCTTATGTG CAGTACACCT CCGTTCCGGC GAGCGCGGTG AATGCCTATT CCGGAATCAC GAACGGGAGC AACACCAGCA CTATCGGCGC TGCCGTTTTG GCAGATTACA GCCTGACCAA CACCATGTCC GTTGCCGGTC GCGTGGAATA CATCGCCAAT TCCGGCAACC CCAACGATGG CGCTGCCAAT CTCACCGGCT TCGGCCCTGG CTCCCATGCC TGGTCCGTCA CCGTCACACC CACCTACCAG GAAGGCGGCT TCTTCGCCCG CGCCGAGTTG TCCTACGTGG ATGCCTCCAT GCCCACCGGC TTTGGTTGGT CCGGCACCAG TGGCGTAGGT GGTACCCAAC TCCGGGGCAT GGTGGAAGGC GGTTTCATGT TCTGA
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Protein sequence | MFNRVAVKKQ CPRIRHRRSM TRISALSALG CLLCFVNEAA QATPLEMPSP LTFQAGPLGT LNVQGVASGY AVWQDNKFAG SGNPGNKSAS ADISNGQVII QKNSGLVQFY LQAGAYNVMS LGSNFVSTGT FTQNTFGALP VGYLEIAPTD NFNVQIGKLP TLIGAEYTFS YQNWNIERGL LWGQENAVNK GIQANYTMGP VTASVSWNDG FYSNRFNWVT GALTWAINKE NSVFFQAGGN MGHTNFAYSS IATTPLQNNE SIYDLGYTYT GENLLVTPYV QYTSVPASAV NAYSGITNGS NTSTIGAAVL ADYSLTNTMS VAGRVEYIAN SGNPNDGAAN LTGFGPGSHA WSVTVTPTYQ EGGFFARAEL SYVDASMPTG FGWSGTSGVG GTQLRGMVEG GFMF
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