| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1885 |
|---|
| Symbol | |
|---|
| ID | 6877870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1871533 |
|---|
| End bp | 1873284 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642789755 |
|---|
| Product | potassium-transporting ATPase, A subunit |
|---|
| Protein accession | YP_002220313 |
|---|
| Protein GI | 198283992 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2060] K+-transporting ATPase, A chain |
|---|
| TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.345668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCCA CCATCATACT GACAGCCGTG GTTTTATTCT TGACCATTCT GCTGGCCTTG
CCTCTGGGAC GCTATATGCA TCGAGTCTAT GCGGGCGATC GATTCTGGGC GACACGCCTG
ATGGGTCCCG TGGAGCGGGG AATTTACCGC GTCACCGGAG TTTCGGCGAG CGAGGAAATG
GGTTGGAAGC GCTACGCCAT CGCCCTGTTG ATCTTTAACC TGATCGGTGG CGTTTTTCTC
TATGCCTTGT TGTTGGCGCA AGGTGCTCTA CCCCTGAATC CTTTACACTT CGGTGGCGTC
CAGGGTGGCT CCGCTTTCAA TACTGCGGTG AGCTTCCTCA CCAATACCAA TTGGCAGGAT
TACGCCGGCG GCTCGACCAT GAGTTATCTC TCGCAGATGC TGGGCCTGAC CGTGCAGAAT
TTCCTCTCGG CGGCGACGGG TATCACCATC GTCCTGCCCA TCATTCGCGC TATCGCCCGT
CATAAAACCA AGGATCTCGG AAATTTCTGG GTCGATATGA CCCGCACCGT TTTATACGTG
CTGCTTCCCC TCTCCGCGCT CTTTGCCTTG ATTCTCATGG AACAGGGCGT GGTCCAAACC
CTCACCGGTG AGGTGCGGGC GGATCTTATT GCACCCTTTG TATCCGGCGG TAAGACCATT
CTTCATCAGA TAATGCATGT GGGACCGGTA GCCTCTCAAG AGGCCATCAT GATGCTCGGC
AACAATGGCG GCGGCTTTTT CAACATGAAC GATGCCCACC CTTTCGAAAA CCCCACCGCT
CTCACCAATT TTTTAGAAAC CCTGGCCATG ATTCTCATTC CCTCCGCACT CGTGTTCCTG
TTTGGGCATA TGGCCAACGC CAAGCGCACA GCATGGGCCA TCCTGATTTC CATGCTGATG
CTCTTCATCC CCCTGACGCT CGTCAGTCAG CACTATCAAC TGGCCGGGAA CCCGGTGTTC
ACCCAGTTGG GGATCTCCCA GGCCAACACC GCGAGTCTTG CCGGCGGTGG CAATATGGAG
GGAGTGGAAG ACCGCATCGG CGCCGGCGCG ACCGCGCTCT TTGCAACGGT GGCCACCGCG
ACCTCTACGG GGGCGGCCAA CGGCGCCTAC GATTCTCTCA TGCCGTTGTC GGGGGGGGTA
AACCTTTTCC TGATGCAATT GGGTGAGGTC GTGTTTGGCG GTGTCGGTTC CGGTCTCGCC
ACTTTCCTCG CCTTCATGAT TTTCGCGGTT TTTCTCGGTG GTCTCATGGT GGGGCGCACG
CCGGAGTTTC TCGGCAAGAA GATCGAGTCC TTTGAAATAA AAATGACCTC CCTCTCCATA
CTGGTCATGC CGTTGCTGGT GTTGATCGGT ACTGCCCTCG CCGTCACCAC GGTGGCGGGG
CGGGCCGGTG TATTCAATCC CGGGGCGCAC GGTTTCAGCG AAGTGCTCTA TGCCGTGACG
AGCCCCGCCA ACAACAACGG CAGCGCATTC GGCGGCCTGA GCAGCAACAC CCGGTTCTAC
AACCTGCTTA CCGGCATGTG CATGCTGTTG GGCCGGTACT GGACCTATCT GCCGTTGCTG
GCGCTGGCGG GTGCTCTGGT CGAGAAAAAG AAAATCCCCG CGGGATCGGG AACACTGACG
ACTTACACGC CTATTTTCAT TGGCCTGACG ATTGGCGTCA TTCTTCTGGT CGGCGCGCTC
AACTTCTTTC CGGCGCTGGC GCTGGGTCCA GTTGCGGAGC AACTCGCGCC CCTGGCCACA
CTGACTCATT GA
|
|---|
| Protein sequence | MISTIILTAV VLFLTILLAL PLGRYMHRVY AGDRFWATRL MGPVERGIYR VTGVSASEEM
GWKRYAIALL IFNLIGGVFL YALLLAQGAL PLNPLHFGGV QGGSAFNTAV SFLTNTNWQD
YAGGSTMSYL SQMLGLTVQN FLSAATGITI VLPIIRAIAR HKTKDLGNFW VDMTRTVLYV
LLPLSALFAL ILMEQGVVQT LTGEVRADLI APFVSGGKTI LHQIMHVGPV ASQEAIMMLG
NNGGGFFNMN DAHPFENPTA LTNFLETLAM ILIPSALVFL FGHMANAKRT AWAILISMLM
LFIPLTLVSQ HYQLAGNPVF TQLGISQANT ASLAGGGNME GVEDRIGAGA TALFATVATA
TSTGAANGAY DSLMPLSGGV NLFLMQLGEV VFGGVGSGLA TFLAFMIFAV FLGGLMVGRT
PEFLGKKIES FEIKMTSLSI LVMPLLVLIG TALAVTTVAG RAGVFNPGAH GFSEVLYAVT
SPANNNGSAF GGLSSNTRFY NLLTGMCMLL GRYWTYLPLL ALAGALVEKK KIPAGSGTLT
TYTPIFIGLT IGVILLVGAL NFFPALALGP VAEQLAPLAT LTH
|
|---|
| |