Gene Lferr_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1871 
Symbol 
ID6877856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1851489 
End bp1852058 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID642789741 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_002220299 
Protein GI198283978 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0919541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATAT CTGCTGTTCT GCTGTTGGCG CTGTTATCAG CGTGGATATT GCTGGAGTTG 
TACCTGGAAT ACTTTTTCCG TTCCCCCATG AATGCGAACA GGCAGGATGG CGGGTCTTCG
AAAATATTCA ACATCGTGAT CCTGTCCAGC GTAGGAAGCT GGGCGTTCGT GTTGGCGCTG
GAGATCCGCC AGGAGCCACA TATCGCGCTC TATCTGCCGC GGGTGGGGGT TTCGTTACTG
GTGGCGGGAC TCATGTTGCG AACATACGCG ATCATGACGT TGAGGAGATA TTTCACCGTG
GATCTGGCCA TTCAGCCCGG ACACCGGCTG ATCCGGCATG GACCCTATCG CATGGTGCGC
CATCCGTCCT ATACGGGTGC GCTGCTCTGT TTTTTGGGGT TGGCGCTGTC GTTTGGCTAC
TGGGCCACCG CCATCCTGAT CGTCGTTCCT GTCATTTTGG CCTACCTCTG GAGAATCGCC
AAAGAGGAAC GCATACTCGC GGATGCCTTC GGGATCGCTT ATCAGGAATA CCGCAACTGC
ACGTACTGCC TTGTTCCCGG TATCATTTAG
 
Protein sequence
MMISAVLLLA LLSAWILLEL YLEYFFRSPM NANRQDGGSS KIFNIVILSS VGSWAFVLAL 
EIRQEPHIAL YLPRVGVSLL VAGLMLRTYA IMTLRRYFTV DLAIQPGHRL IRHGPYRMVR
HPSYTGALLC FLGLALSFGY WATAILIVVP VILAYLWRIA KEERILADAF GIAYQEYRNC
TYCLVPGII