Gene Lferr_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1866 
Symbol 
ID6877850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1847100 
End bp1848176 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID642789735 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_002220294 
Protein GI198283973 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA AGCTGTTTTC CTCCTGGACG TTACGCAGCG TCACCCTGCG CAACCGCATC 
TGCGTGGCGC CCATGTGCCA GTATTCCACA CCCGATGGCG TCGCTGGGGA CTGGCATATG
GTGCATCTCG GCAGCCGCGC CGTGGGTGGC GCCGGGCTGG TCATGGTGGA AGCGGCTGCC
ATCAGCCCGG AAGGCCGCAT TTCCCCCCGC GACCTCGGTA TCTGGACGGA TGCGCAGGCG
CGGGCACTGG CTCCCATCGT GGCGTTCATG AAGACGCAGG GGACGGTCAC CGCCATTCAG
ATCGCCCATG CGGGACGGAA GGCGTCCACC CGGCCGCCCT TTCTCGGTGG CGACCCCATT
GCGCCCGATG CCGAGGGCGG CTGGGAGCCT CTGGGACCCA GTGCCCTGCC CTTCCACCAC
AGCCATACCG TGCCCCACGC CATGGACGCC CAGAACCTGG AGAAGGTACG CAGGGACTTT
GTGGCCGCGG CCAGACGTGC ACTGGCCGCG GGATTCGAGG TTCTGGAACT GCACATGGCC
CACGGCTATC TGCTGCACAG CTTTCTGTCC CCCATCAGCA ACCAGCGGAC CGACGACTAC
GGCGGCAGCC TGGAAAACCG CATGCGCCTG CCACTGGAAA TCACCGCTGC CGTGCGCGCG
GTGTGGCCCG AAGATCTGCC CCTCTGGGTG AGGATTTCCG CCACGGACTG GGTGCGCGGC
GGCTGGGATC TGGAGCAGTC CGTCGTCCTC GCCAAAGCGT TGAAGGACCG TGGCGTGGAC
GTCATCGATT GCAGCAGCGG TGGCATGACG CCGGATGCCG TCATCCCCGC CGGCCCCGGC
TTCCAGACGC CTTTCGCCAG CGCCATCCGC CAGGAGGTCG GCATGCCCAC CGTCGCTGTC
GGCCTCATCA CCGAGGCGAT GCAGGCAGAA CACATCCTCG TCACCGAACA GGCTGACGCC
GTGGCCCTGG CCCGGGAACT GCTGCGCAAC CCCTACTGGC CCCTGCACGC GGCCCGAGAA
CTCGGCGTCG ATATCGCCTG GCCCGTACAG TACGATCGCG CCAAAGCACG CCCATAA
 
Protein sequence
MTHKLFSSWT LRSVTLRNRI CVAPMCQYST PDGVAGDWHM VHLGSRAVGG AGLVMVEAAA 
ISPEGRISPR DLGIWTDAQA RALAPIVAFM KTQGTVTAIQ IAHAGRKAST RPPFLGGDPI
APDAEGGWEP LGPSALPFHH SHTVPHAMDA QNLEKVRRDF VAAARRALAA GFEVLELHMA
HGYLLHSFLS PISNQRTDDY GGSLENRMRL PLEITAAVRA VWPEDLPLWV RISATDWVRG
GWDLEQSVVL AKALKDRGVD VIDCSSGGMT PDAVIPAGPG FQTPFASAIR QEVGMPTVAV
GLITEAMQAE HILVTEQADA VALARELLRN PYWPLHAARE LGVDIAWPVQ YDRAKARP