Gene Lferr_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1864 
Symbol 
ID6877848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1845780 
End bp1846394 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content59% 
IMG OID642789733 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002220292 
Protein GI198283971 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0665556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATAC AGCCCCTACG GAAAACCCGT AACCCGGAGC AGACCCGCAG CGATCTACTG 
GACGCCGCCT ATATCGAGAT TTTGGAATCC GGCTTTCAGG CGGCCAGCCT GGAACGCATT
CTTGCCAATA CCTCGGTAAG CAAAGGCGCG CTCTACCATC ACTTCGGCAC CAAGCGCGAA
CTGGGGCTGG CCGTAGTCGA AGAAGTGATT GCGCCGCAAC TTGCGGTGCG GTGGTTCGCC
CCTTTTGCCG AGCACGATGA CCCTTTGGTC AGCCTCCAGC GTATTCTCGA AGAAAAAATC
ACTACTGCCG ACGAATCCGT CATCCGCTAC GGCTGTCCCC TCAATAATCT CATCCAGGAG
ATGAGCCCCC TCGATGAGGC GTTCCGCTGC GGGTTGCAGC AGATTCTCGA TCGCTGGGTC
GCGGTCATGG CCGACGCCTT GGCCAGGGGG CAGACCGCCG GCAAGGTGCG CACCGACGTC
GAGGCGAAAG AGGTAGCACT CTTCATCGTT GCCGCCATCG AAGGCTGCGT CGGCCTGGGC
AAAAATGCGC AGCGTGCCGC TTTTTTCTGC TTCCTGACCG CAGCAAGGAG ATATCATGTC
GCAGATCACC TCTGA
 
Protein sequence
MMIQPLRKTR NPEQTRSDLL DAAYIEILES GFQAASLERI LANTSVSKGA LYHHFGTKRE 
LGLAVVEEVI APQLAVRWFA PFAEHDDPLV SLQRILEEKI TTADESVIRY GCPLNNLIQE
MSPLDEAFRC GLQQILDRWV AVMADALARG QTAGKVRTDV EAKEVALFIV AAIEGCVGLG
KNAQRAAFFC FLTAARRYHV ADHL