Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1862 |
Symbol | |
ID | 6877846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1843539 |
End bp | 1844366 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789731 |
Product | nicotinate-nucleotide pyrophosphorylase |
Protein accession | YP_002220290 |
Protein GI | 198283969 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.65169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCCG CTGACGTATT ACACACGGTA CAAGAGGCGC TTGCCGAAGA TATCGGCAGC GGTGACCTGA CCGCAGCACT CATTCCGGCA GATCAGGAAT TGCGCGCGCG CATCATCAGC CGGGAAGCGG GCATTCTTTG CGGACGTCCC TATGCGGATG CCACTTTCGC CGCGCTATCC CCCGCCCTTC AGATCCACTG GCAATTGGCC GAAGGCGCGT GGATGCTGCC CGATCAGGAA ATCTGCCGCA TTGCCGGTCC TGCCAGGGCC CTGCTCAGCG GCGAGCGCAC CGCGCTGAAT TTCCTGCAGA CGCTCTCCGG TACCGCCACC CTGGTCAGGA CTTTTGTCGA CCTGTTGCGC GGTCATAAAA CCCACCTGCT GGACACTCGT AAAACCATCC CCGGCCTGCG TCACGCGCAA AAATATGCGG TGCGCATCGG TGGCGGACAC AACCACCGAC TGGGCCTATA CGATGGCATT CTCATCAAGG AAAATCACAT CGCTGCCTGC GGCAGCATCG CGGCGGCACT GCAGGCGGCC CGGCATCTGG CTCCGGCACT CACCCGCATC GAAATTGAAG TGGAAAATCT GAGCCAGTTG GAAGAAGCGC TGAGCGCGGG TGCCGACATG ATCCTTCTCG ACAACTTTAC CCTGGAGGAT TTGCGCCTTG CCGTGCAGCG AGTCGCAGGG CGTCTGCCCC TGGAGGCATC GGGGAATATG GACCTGCACA ATATCACTGA AGCAGCGGCC ACCGGCGTGG ATTTCATTTC CGTGGGCAGC CTCACCCGCC ATCTGCGCAG CCTGGATCTG TCGCTGCGCC ATCTCTGA
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Protein sequence | MIPADVLHTV QEALAEDIGS GDLTAALIPA DQELRARIIS REAGILCGRP YADATFAALS PALQIHWQLA EGAWMLPDQE ICRIAGPARA LLSGERTALN FLQTLSGTAT LVRTFVDLLR GHKTHLLDTR KTIPGLRHAQ KYAVRIGGGH NHRLGLYDGI LIKENHIAAC GSIAAALQAA RHLAPALTRI EIEVENLSQL EEALSAGADM ILLDNFTLED LRLAVQRVAG RLPLEASGNM DLHNITEAAA TGVDFISVGS LTRHLRSLDL SLRHL
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